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Patrick A. Newbury
Researcher at Michigan State University
Publications - 19
Citations - 137
Patrick A. Newbury is an academic researcher from Michigan State University. The author has contributed to research in topics: Cancer & Metastatic breast cancer. The author has an hindex of 4, co-authored 15 publications receiving 71 citations.
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Journal ArticleDOI
Evaluating cell lines as models for metastatic breast cancer through integrative analysis of genomic data
Ke Liu,Patrick A. Newbury,Benjamin S. Glicksberg,William Z. D. Zeng,Shreya Paithankar,Eran R. Andrechek,Bin Chen +6 more
TL;DR: Comparison of genomic and transcriptomic profiles of different breast cancer cell lines and organoids to data from patient-derived breast cancer metastases reveals substantial genomic differences and suggests that organoids more closely resemble the transcriptome of metastatic breast cancer samples compared to cell lines.
Journal ArticleDOI
OCTAD: an open workspace for virtually screening therapeutics targeting precise cancer patient groups using gene expression features.
Billy Zeng,Billy Zeng,Benjamin S. Glicksberg,Benjamin S. Glicksberg,Patrick A. Newbury,Evgeny Chekalin,Jing Xing,Ke Liu,Anita Wen,Caven Chow,Bin Chen +10 more
TL;DR: Open Cancer TherApeutic Discovery (OCTAD) as discussed by the authors is a software pipeline for finding drugs that alter gene expression in such a way that they are likely to reverse the expression pattern of the disease.
Posted ContentDOI
OCTAD: an open workplace for virtually screening therapeutics targeting precise cancer patient groups using gene expression features
Billy Zeng,Billy Zeng,Benjamin S. Glicksberg,Patrick A. Newbury,Jing Xing,Ke Liu,Anita Wen,Caven Chow,Bin Chen +8 more
TL;DR: This work presents OCTAD: an open workplace for virtually screening compounds targeting precise cancer patient groups using gene expression features and releases OCTAD as a web portal and standalone R workflow to allow experimental and computational scientists to easily navigate the tool.
Journal ArticleDOI
Gene expression signatures identify paediatric patients with multiple organ dysfunction who require advanced life support in the intensive care unit.
Rama Shankar,Mara Leimanis,Mara Leimanis,Patrick A. Newbury,Ke Liu,Jing Xing,Derek Nedveck,Eric J. Kort,Eric J. Kort,Eric J. Kort,Jeremy W. Prokop,Guoli Zhou,André S. Bachmann,Bin Chen,Surender Rajasekaran,Surender Rajasekaran,Surender Rajasekaran +16 more
TL;DR: This study demonstrates that transcriptomic features can serve as indicators of severity that could be superior to traditional methods of ascertaining acuity in MODS patients.
Journal ArticleDOI
The Effects of Motorcycle Helmet Legislation on Craniomaxillofacial Injuries.
Nicholas S Adams,Patrick A. Newbury,Mitchell G. Eichhorn,Alan T. Davis,Robert J. Mann,John W. Polley,John A. Girotto +6 more
TL;DR: This study highlights the significant negative impact of relaxed motorcycle helmet laws leading to an increase in craniomaxillofacial injuries in Michigan and urges state and national legislators to reestablish universal helmet laws.