The retina, like many other central nervous system structures, contains a huge diversity of neuronal types. Mammalian retinas contain approximately 55 distinct cell types, each with a different function. The census of cell types is nearing completion, as the development of quantitative methods makes it possible to be reasonably confident that few additional types exist. Although much remains to be learned, the fundamental structural principles are now becoming clear. They give a bottom-up view of the strategies used in the retina’s processing of visual information and suggest new questions for physiological experiments and modeling.

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The fundamental plan of the retina

Our eyes send different 'images' of the outside world to the brain - an image of contours (line drawing), a colour image (watercolour painting) or an image of moving objects (movie). This is commonly referred to as parallel processing, and starts as early as the first synapse of the retina, the cone pedicle. Here, the molecular composition of the transmitter receptors of the postsynaptic neurons defines which images are transferred to the inner retina. Within the second synaptic layer - the inner plexiform layer - circuits that involve complex inhibitory and excitatory interactions represent filters that select 'what the eye tells the brain'.

Parallel processing in the mammalian retina.

Comprehensive high-resolution structural maps are central to functional exploration and understanding in biology. For the nervous system, in which high resolution and large spatial extent are both needed, such maps are scarce as they challenge data acquisition and analysis capabilities. Here we present for the mouse inner plexiform layer--the main computational neuropil region in the mammalian retina--the dense reconstruction of 950 neurons and their mutual contacts. This was achieved by applying a combination of crowd-sourced manual annotation and machine-learning-based volume segmentation to serial block-face electron microscopy data. We characterize a new type of retinal bipolar interneuron and show that we can subdivide a known type based on connectivity. Circuit motifs that emerge from our data indicate a functional mechanism for a known cellular response in a ganglion cell that detects localized motion, and predict that another ganglion cell is motion sensitive.

Connectomic reconstruction of the inner plexiform layer in the mouse retina

Psychopharmacology: The Fourth Generation of Progress.

In the cerebral cortex, local circuits consist of tens of thousands of neurons, each of which makes thousands of synaptic connections. Perhaps the biggest impediment to understanding these networks is that we have no wiring diagrams of their interconnections. Even if we had a partial or complete wiring diagram, however, understanding the network would also require information about each neuron's function. Here we show that the relationship between structure and function can be studied in the cortex with a combination of in vivo physiology and network anatomy. We used two-photon calcium imaging to characterize a functional property--the preferred stimulus orientation--of a group of neurons in the mouse primary visual cortex. Large-scale electron microscopy of serial thin sections was then used to trace a portion of these neurons' local network. Consistent with a prediction from recent physiological experiments, inhibitory interneurons received convergent anatomical input from nearby excitatory neurons with a broad range of preferred orientations, although weak biases could not be rejected.

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Network anatomy and in vivo physiology of visual cortical neurons

Anatomical and electrophysiological techniques were combined to study the morphology, synaptic connections, and response properties of two neurons in the rod pathway of the rabbit retina: the rod bipolar cell and the narrow-field, bistratified (NFB) amacrine cell. Rod bipolars receive synaptic input from rod cells in the outer plexiform layer (OPL), where their dendrites end as central elements in the invaginating synapse of rod spherules. Their main synaptic output in the inner plexiform layer (IPL) is onto NFB amacrine cells and at least one other type of amacrine, which in turn feeds a reciprocal synapse back onto the bipolar endings. Rod bipolars, or a variety of them, respond to diffuse, white light stimulation with a transient-sustained depolarization dominated by rods; with high-intensity flashes, they generate a secondary depolarization at off, which is homologous to the rod aftereffect of horizontal cells, although opposite in polarity. NFB amacrine cells receive synaptic input from rod bipolars, cone bipolars, and other types of amacrine cells; they are presynaptic to ganglion cell dendrites and communicate via gap junctions with other processes, whose parent neuron has not yet been identified. They respond to light with a triphasic potential, characterized by a depolarizing transient at on, followed by a sustained plateau phase, and finally by a hyperpolarizing transient at off. Threshold of their responses is the same as in the depolarizing rod bipolars and saturation is reached with nearly the same stimulus intensity in both neurons. Furthermore, NFB amacrine cells exhibit a depolarizing rod aftereffect at the termination of high-intensity flashes. Thus, this amacrine cell type is inserted in series along the rod pathway in the rabbit retina and modulates the transfer of scotopic signals from rod bipolars to ganglion cells.

https://www.jneurosci.org/content/jneuro/6/2/331.full.pdf

The rod pathway in the rabbit retina: a depolarizing bipolar and amacrine cell

The synaptic connections of the narrow-field, bistratified rod amacrine cell (AII) in the inner plexiform layer (IPL) of the rabbit retina were reconstructed from electron micrographs of continuous series of thin sections. The AII amacrine cell receives a large synaptic input from the axonal endings of rod bipolar cells in the most vitreal region of the IPL (sublamina b, S5) and a smaller input from axonal endings of cone bipolar cells in the scleral region of the IPL (sublamina a, S1-S2). Amacrine input, localized at multiple levels in the IPL, equals the total number of synapses received from bipolar cells. The axonal endings of cone bipolar cells represent the major target for the chemical output of the AII amacrine cell: these synapses are established by the lobular appendages in sublamina a (S1-S2). Ganglion cell dendrites represent only 4% of the output of the AII amacrine and most of them are also postsynaptic to the cone bipolars which receive AII input. The AII amacrine is not presynaptic to other amacrine cells. Finally, the AII amacrine makes gap junctions with the axonal arborizations of cone bipolars that stratify in sublamina b (S3-S4) as well as with other AII amacrine cells in S5. Therefore, in the rabbit retina 1) the rod pathway consists of five neurons arranged in series: rod-->rod bipolar-->AII amacrine-->cone bipolar-->ganglion cell; 2) it seems unlikely that a class of ganglion cells exists that is exclusively devoted to scotopic functions. In ventral, midperipheral retina, about nine rod bipolar cells converge onto a single AII amacrine, but one of them establishes a much higher proportion of synaptic contacts than the rest. Conversely, each rod bipolar cell diverges onto four AII amacrine cells, but one of them receives the largest fraction of synapses. Thus, within the pattern of convergence and divergence suggested by population studies, preferential synaptic pathways are established.

Synaptic connections of the narrow-field, bistratified rod amacrine cell (AII) in the rabbit retina

Amacrine cells of the rabbit retina were studied by ‘‘photofilling,’’ a photochemical method in which a fluorescent product is created within an individual cell by focal irradiation of the nucleus; and by Golgi impregnation. The photofilling method is quantitative, allowing an estimate of the frequency of the cells. The Golgi method shows their morphology in better detail. The photofilled sample consisted of 261 cells that were imaged digitally in throughfocus series from a previous study (MacNeil and Masland [1998] Neuron 20:971‐982). The Golgi material consisted of 49 retinas that were stained as wholemounts. Eleven of these subsequently were cut in vertical section. Of the many hundreds of cells stained, digital through-focus series were recorded for 208 of the Golgi-impregnated cells. The two methods were found to confirm one another: Most cells revealed by photofilling were recognized easily by Golgi staining, and vice versa. The greater resolution of the Golgi method allowed a more precise description of the cells and several types of amacrine cell were redefined. Two new types were identified. The two methods, taken together, provide an essentially complete accounting of the populations of amacrine cells present in the rabbit retina. Many of them correspond to amacrine cells that have been described in other mammalian species, and these homologies are reviewed. J. Comp. Neurol. 413:305‐326, 1999. r 1999 Wiley-Liss, Inc.

The shapes and numbers of amacrine cells: matching of photofilled with Golgi-stained cells in the rabbit retina and comparison with other mammalian species.

We have reconstructed from electron micrographs of a continuous series of thin sections the synaptic connections of the axonal arborizations of all the rod bipolar cells contained in a small region of the retina of the rabbit. We observed that all rod bipolars share the same pattern of connectivity and are probably functionally equivalent. As a rule, they do not contact ganglion cells. Their prevalent synaptic output is on narrow-field, bistratified, and indoleamine-accumulating amacrine cells. Their dominant inputs are the reciprocal synapses from the indoleamine-accumulating amacrines, but they also receive a sizable number of synaptic contacts from other, non-reciprocal, amacrine cells. The lateral spread of scotopic signals at the synapse between rod bipolars and narrow-field, bistratified amacrines is small. Finally, in the rabbit, as in the cat, a narrow-field, bistratified amacrine is inserted in series along the rod pathway.

Synaptic connections of rod bipolar cells in the inner plexiform layer of the rabbit retina.

The light responses, morphology, and connections of horizontal cells (HCs) were studied in the retina of the rabbit using intracellular recordings and the injection of visible markers. Two types of HCs were identified, axonless and axon-bearing HCs. Axonless HCs and the somatic end of axon-bearing HCs respond to white light of varying intensity with graded hyperpolarizations; both display a transient superimposed on the sustained hyperpolarization at stimulus initiation and a small rod aftereffect at the cessation of high intensity stimuli. Anatomically, both are connected to cones, but their responses also suggest rod influence. Both summate stimuli from a retinal area which is much larger than their respective fields. However, only axonless HCs transfer a fluorescent, low molecular weight dye to adjoining, homologous cells. The axon terminal of axon-bearing HCs has response properties different from those of the cell body: the transient at stimulus initiation is absent; furthermore, at high levels of illumination, the rod aftereffect becomes equal in amplitude to the primary hyperpolarization. Anatomically, it is connected to rods, but its responses also suggest cone influence. Its receptive field approximates in diameter its anatomical spread and it does not transfer fluorescent dye to its neighbors.

https://www.jneurosci.org/content/jneuro/2/10/1486.full.pdf

Ramon F. Dacheux

Papers

The rod pathway in the rabbit retina: a depolarizing bipolar and amacrine cell

Synaptic connections of the narrow-field, bistratified rod amacrine cell (AII) in the rabbit retina

The shapes and numbers of amacrine cells: matching of photofilled with Golgi-stained cells in the rabbit retina and comparison with other mammalian species.

Synaptic connections of rod bipolar cells in the inner plexiform layer of the rabbit retina.

Horizontal cells in the retina of the rabbit