So far in this course we have dealt entirely with the evolution of characters that are controlled by simple Mendelian inheritance at a single locus. There are notes on the course website about gametic disequilibrium and how allele frequencies change at two loci simultaneously, but we didn’t discuss them. In every example we’ve considered we’ve imagined that we could understand something about evolution by examining the evolution of a single gene. That’s the domain of classical population genetics. For the next few weeks we’re going to be exploring a field that’s actually older than classical population genetics, although the approach we’ll be taking to it involves the use of population genetic machinery. If you know a little about the history of evolutionary biology, you may know that after the rediscovery of Mendel’s work in 1900 there was a heated debate between the “biometricians” (e.g., Galton and Pearson) and the “Mendelians” (e.g., de Vries, Correns, Bateson, and Morgan). Biometricians asserted that the really important variation in evolution didn’t follow Mendelian rules. Height, weight, skin color, and similar traits seemed to

Human biochemical genetics

Statistical Methods For Agricultural Workers

A reviewer for the Journal of the Royal Statistical Society of England comments \"This is the first book covering in one volume all important topics in genetical statistics.\" Written to provide basic probability ideas in terms of genetic situations, since the theory of genetics is a probability theory; to give a definitive treatment of applications of these ideas to genetic theory; and to describe statistical methods appropriate to the data models that are developed.

An Introduction to Genetic Statistics

An Introduction to Genetic Statistics.

Plant tissue culture has become one of the fundamental tools of plant science research. It is extensively employed in the production, conservation and improvement of plant resources. The presence of somaclonal variation in populations derived from tissue culture is affecting the use of tissue culture negatively and has remained a major problem. Conversely, it is a source of new desirable clones/variants with better agronomic traits. In this review, we summarize the possible causes, detection methods and desirability of variants. Somaclonal variation is one of the most researched and reviewed topics. Hence, we restricted ourselves to outlining various examples which may be used as important references for researchers who intend to identify and/or characterize somaclonal variants while using tissue culture for research and production. Emphasis is placed on the negative effects of somaclonal variation. However, this review also includes examples of some useful variants generated as a result of somaclonal variation.

Somaclonal variation in plants: causes and detection methods

Assessment of clonal fidelity of micropropagated gerbera plants by ISSR markers

The genetic fidelity of in vitro-raised gerbera clones was assessed by using random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) markers. Out of 35 RAPD and 32 ISSR primers screened, only 12 RAPD and 10 ISSR primers produced clear, reproducible and scorable bands. The 12 RAPD primers produced 54 distinct and scorable bands, with an average of 4.5 bands per primer. The number of scorable bands for ISSR primers varied from 3 (ISSR-14) to 9 (ISSR-07), with an average of 5.5 bands per primer. The number of bands generated per primer was greater in ISSR than RAPD. All banding profiles from micropropagated plants were monomorphic and similar to those of the mother plant. A similarity matrix based on Jaccard’s coefficient revealed that the pair-wise value between the mother and the in vitro-raised plantlets was 1, indicating 100% similarity. This confirmed the true-to-type nature of the in vitro-raised clones.

http://staff.cimap.res.in/PublicationFiles/Plant_Cell_Tissue_and_Organ_Culture_DOI_10.1007s11240.pdf

Evaluation of the genetic fidelity of in vitro-propagated gerbera (Gerbera jamesonii Bolus) using DNA-based markers

This study is the first report of combining ability and heterosis for important vitamins and antioxidant plant pigments in cauliflower. Five CMS lines were crossed with 8 male fertile lines in line × tester design to develop 40 hybrids. These hybrids along with parental lines were evaluated for different vitamins and anti-oxidant pigments to reveal extent of heterosis and genetic combining ability. The CMS line Ogu12A was good general combiner (gca effect) and Ogu16A was poor general combiner for most of the important traits under study. Most of the heterotic hybrid combinations were associated high specific combing ability (sca effect). However, gca effect was also important in developing quality heterotic hybrids. The proportions of $$\sigma_{\text{gca}}^{ 2} /\sigma_{\text{sca}}^{2}$$
 were less than unity in all the cases indicating the role of non-additive gene action for most of the traits. Highest number of heterotic hybrids in positive direction was recorded for ascorbic acid content followed by anthocyanin content. The accumulated average heterosis of the 40 hybrids was in positive direction for ascorbic acid, anthocyanin and lycopene concentration whereas it was in negative direction for carotenoids and chlorophyll pigments. Very high heterosis for ascorbic acid, anthocyanin and carotenoids in cauliflower indicated the scope for development of F1 hybrids with higher concentration of these vitamins and anti-oxidant pigments. It is possible to develop heterotic hybrids for different vitamins and anti-oxidant plant pigments through selection of parental lines based on desirable genetic combing ability.

Genetic combining ability and heterosis for important vitamins and antioxidant pigments in cauliflower ( Brassica oleracea var. botrytis L.)

Efficient microspore embryogenesis in cauliflower (Brassica oleracea var. botrytis L.) for development of plants with different ploidy level and their use in breeding programme

Overview of the current status of GMS and CMS systems available in Brassica vegetables, their molecular mechanism, wild sources of sterile cytoplasm and exploitation of male sterility in hybrid breeding. The predominantly herbaceous family Brassicaceae (crucifers or mustard family) encompasses over 3700 species, and many of them are scientifically and economically important. The genus Brassica is an economically important genus within the tribe Brassicaceae that comprises important vegetable, oilseed and fodder crops. Brassica vegetables display strong hybrid vigor, and heterosis breeding is the integral part in their improvement. Commercial production of F1 hybrid seeds in Brassica vegetables requires an effective male sterility system. Among the available male sterility systems, cytoplasmic male sterility (CMS) is the most widely exploited in Brassica vegetables. This system is maternally inherited and studied intensively. A limited number of reports about the genic male sterility (GMS) are available in Brassica vegetables. The GMS system is reported to be dominant, recessive and trirecessive in nature in different species. In this review, we discuss the available male sterility systems in Brassica vegetables and their potential use in hybrid breeding. The molecular mechanism of mt-CMS and causal mitochondrial genes of CMS has been discussed in detail. Finally, the exploitation of male sterility system in heterosis breeding of Brassica vegetables, future prospects and need for further understanding of these systems are highlighted.

Reeta Bhatia

Papers

Assessment of clonal fidelity of micropropagated gerbera plants by ISSR markers

Evaluation of the genetic fidelity of in vitro-propagated gerbera (Gerbera jamesonii Bolus) using DNA-based markers

Genetic combining ability and heterosis for important vitamins and antioxidant pigments in cauliflower ( Brassica oleracea var. botrytis L.)

Efficient microspore embryogenesis in cauliflower (Brassica oleracea var. botrytis L.) for development of plants with different ploidy level and their use in breeding programme

Current understanding of male sterility systems in vegetable Brassicas and their exploitation in hybrid breeding