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Robert Vaser
Researcher at University of Zagreb
Publications - 16
Citations - 2982
Robert Vaser is an academic researcher from University of Zagreb. The author has contributed to research in topics: Sequence assembly & Nanopore sequencing. The author has an hindex of 8, co-authored 15 publications receiving 1681 citations. Previous affiliations of Robert Vaser include Genome Institute of Singapore.
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Fast and accurate de novo genome assembly from long uncorrected reads
TL;DR: It is shown that the error-correction step can be omitted and that high-quality consensus sequences can be generated efficiently with a SIMD-accelerated, partial-order alignment-based, stand-alone consensus module called Racon.
Journal ArticleDOI
SIFT missense predictions for genomes
TL;DR: The scope of genomic predictions is expanded, with predictions available for more than 200 organisms, and the SIFT 4G algorithm, which is a faster version of SIFT that enables practical computations on reference genomes, is described.
Journal ArticleDOI
Time- and memory-efficient genome assembly with Raven
TL;DR: Methods for the improvement of de novo genome assembly from erroneous long reads incorporated into a tool called Raven, which is one of the fastest options while having the lowest memory consumption on the majority of benchmarked datasets.
Raven source code used in the manuscript "Time and memory efficient genome assembly with Raven"
Robert Vaser,Mile Šikić +1 more
Posted ContentDOI
Raven: a de novo genome assembler for long reads
TL;DR: New methods for the improvement of long-read de novo genome assembly incorporated into a straightforward tool called Raven, which is one of two fastest, it reconstructs the sequenced genome in the least amount of fragments, has better or comparable accuracy, and maintains similar performance for various genomes.