https://onlinelibrary.wiley.com/doi/pdf/10.1046/j.1469-0691.2003.00560.x

Viruses causing gastroenteritis.

The aims of this study were to investigate the prevalence of campylobacteria including Campylobacter jejuni subsp. jejuni (C. jejuni) and Campylobacter coli in human clinical samples and in samples from healthy individuals and to reevaluate the efficacies of conventional selective methods for isolation of Campylobacter spp. Two charcoal-based selective media, modified charcoal cefoperazone deoxycholate agar (mCCDA) and cefoperazone-amphotericin-teicoplanin (CAT) agar, were compared with Skirrow's blood-based medium and with a filter method (filter) applied to a yeast-enriched blood agar. A total of 1,376 specimens were tested on all four media, and the percentages of thermophilic Campylobacter-positive specimens isolated on Skirrow's medium, filters, CAT agar, and mCCDA were 82, 83, 85, and 95%, respectively. When additional samples were processed with the three selective media, mCCDA recovered significantly more thermophilic Campylobacter spp. than Skirrow's medium (P = 0.0034). No significant difference between Skirrow's medium and CAT agar was observed in this study. Another six taxa were identified, namely, Campylobacter concisus, Campylobacter curvus-like bacteria, Arcobacter butzleri, Arcobacter cryaerophilus, Helicobacter cinaedi, and Sutterella wadsworthensis. Most of these strains were isolated after 5 to 6 days of incubation by use of the filter technique. This paper provides evidence for the existence of S. wadsworthensis in human feces from clinical cases of gastrointestinal disorders and in feces from a healthy individual. Furthermore, C. concisus was isolated from a large number of diarrheal cases, particularly those at the extremes of age, but was additionally isolated from the feces of healthy people. Further investigations to establish the role of C. concisus and S. wadsworthensis in enteric disease is needed. We conclude that a range of campylobacteria may cause infections in Denmark.

Prevalence of Campylobacter, Arcobacter, Helicobacter, and Sutterella spp. in Human Fecal Samples as Estimated by a Reevaluation of Isolation Methods for Campylobacters

During an 8-year study period, Arcobacter butzleri was the fourth most common Campylobacter-like organism isolated from 67,599 stool specimens. Our observations suggest that A. butzleri displays microbiologic and clinical features similar to those of Campylobacter jejuni; however, A. butzleri is more frequently associated with a persistent, watery diarrhea.

/pdf/arcobacter-species-in-humans-3vxjsfzt88.pdf

Arcobacter species in humans.

Macrolide resistance has been demonstrated in group B streptococcus (GBS), but there is limited information regarding mechanisms of resistance and their prevalence. We determined these in GBS obtained from neonatal blood cultures and vaginal swabs from pregnant women. Of 178 isolates from cases of neonatal GBS sepsis collected from 1995 to 1998, 8 and 4.5% were resistant to erythromycin and clindamycin, respectively, and one isolate showed intermediate penicillin resistance (MIC, 0.25 μg/ml). Of 101 consecutive vaginal or rectal/vaginal isolates collected in 1999, 18 and 8% were resistant to erythromycin and clindamycin, respectively. Tetracycline resistance was high (>80%) among both groups of isolates. Of 32 erythromycin-resistant isolates, 28 possessed the erm methylase gene (7 ermB and 21 ermTR/ermA ) and 4 harbored the mefA gene; one isolate harbored both genes. One isolate which was susceptible to erythromycin but resistant to clindamycin (MIC, 4 μg/ml) was found to have the linB gene, previously identified only in Enterococcus faecium . The mreA gene was found in all the erythromycin-resistant strains as well as in 10 erythromycin-susceptible strains. The rate of erythromycin resistance increased from 5% in 1995–96 to 13% in 1998–99, which coincided with an increase in macrolide usage during that time.

Prevalence and Mechanisms of Macrolide Resistance in Invasive and Noninvasive Group B Streptococcus Isolates from Ontario, Canada

https://www.clinicalmicrobiologyandinfection.com/article/S1198-743X(14)64283-X/pdf

Evaluation of seven commercial antigen detection tests for Giardia and Cryptosporidium in stool samples.

Fuchsin fluorescence and autofluorescence in Cryptosporidium, Isospora and Cyclospora oocysts

The study presented here examined the efficacy of a commercially available qualitative immunochromatographic assay for detecting Cryptosporidium oocysts in stool samples. A total of 75 samples were tested, including 50 positive for Cryptosporidium spp. by acid-fast stain, 20 positive for other parasites (Blastocystis hominis, Endolimax nana, Entamoeba coli, Giardia lamblia, Ascaris lumbricoides, Strongyloides stercoralis and Trichuris trichiura), and five negative samples. The observed sensitivity was 98%, while specificity was 100%; the detection threshold was near 1,000 oocysts/ml. Correctly diagnosed positive samples included Cryptosporidium parvum genotypes 1 and 2, whereas the single false-negative sample corresponded to a Cryptosporidium meleagridis infection.

Evaluation of an immunochromatographic dip-strip test for the detection of Cryptosporidium oocysts in stool specimens.

A study was conducted to assess the value of a combination of two culture methods for isolation ofCampylobacter spp. from Spanish children. Seven hundred twenty-nine diarrhoea] stool specimens from 599 patients were examined forCampylobacter spp. by culturing them on charcoal cefoperazone deoxycholate agar and on blood agar with a membrane filter. One hundred sixteenCampylobacter strains were isolated from a total of 108 specimens; 75 (64.6%) wereCampylobacter jejuni, 32 (27.5%) wereCampylobacter coli, 8 (6.8%) were non-typeable, and one (0.9%) wasCampylobacter upsaliensis. Campylobacters were isolated from 99 positive samples using charcoal cefoperazone deoxycholate agar alone. The filtration technique alone yielded only 86 positive samples. Seven specimens yielded differentCampylobacter spp. with different media. The only catalase-negative strain was recovered using the filter method. The combination of the selective medium with the filter method increased the isolation rate ofCampylobacter strains by 14.1%. Isolation rates of campylobacters using the filter method were similar to those reported in European studies, in which a similar frequency ofCampylobacter upsaliensis was observed. The addition of a filter method for routine laboratory isolation of campylobacters should be considered in selected age groups (in children <10 years of age) or in areas where catalase-negative or weakly-positiveCampylobacter strains may be of epidemiological significance.

Use of a Selective Medium and a Membrane Filter Method for Isolation of Campylobacter Species from Spanish Paediatric Patients

The incidence of astrovirus infection in children less than 10 years of age with gastroenteritis in the city of Zaragoza, Spain, was analysed during a 12-month period. A total of 718 stool samples obtained from 534 children were examined. In 401 samples no routinely searched for pathogenic organism was detected; these specimens were then tested for the presence of astrovirus antigens. Astrovirus was detected in the samples of 15 (5.5%) patients, a detection rate similar to that recognised for Yersinia enterocolitica and Cryptosporidium spp. All children with confirmed astrovirus infection had diarrhoea (median duration, 9 days), 11 experienced loss of appetite, 5 vomiting, and 4 fever. The incidence of astrovirus infection reported here indicates that Spanish children suffering from gastroenteritis should be routinely screened for the presence of astrovirus.

Astrovirus infection among children with gastroenteritis in the city of Zaragoza, Spain.

To study the most important epidemiologic features of shigellosis and the application of colicinotyping as an epidemiologic marker for Shigella sonnei. A total of 44.818 stoll-cultures were performed. We classify, using colicinotyping, 156 Shigella sonnei strains isolated from different patients. The incidence of Shigellosis in our media is low (1.08% of all stool-cultures). It is more frequent in pediatric population and increases on late summer and fall. We had been able to show an increasing incidence, with an hyperendemic situation during a three-years period (1981-1983). Shigella sonnei is the most prevalent species (86% of cases), followed by S. boydii (7.3%) and S. flexneri (5.9%). All S. sonnei strains epidemiologically related showed the same colicinotype. Only two strains were not typable and we identified 9 different colicinotypes, being type 13 (30.8%), type 8 (18.6%), type 6 (17.3%) and type 12 (11.54%) the more frequent types. Colicinotype 8 was the more prevalent between 1978-1979. Type 13 was predominant between 1981 and 1985. During 1987 and 1989, at the same time that incidence had risen, types 6 and 12 were prevalent. The total number of different colicinotypes identified during a single year is never greater than five. Colicinotyping of S. sonnei is a simple typing method that gives enough useful epidemiologic information, discriminative and reproducible. Although there are changes of circulating types incidence and the prevalen colicinotype colud vary from one year to another, during longer periods of time there is a reduced number of alternating colicinotypes, which sets up a situation that could be further classified as endemic.

Rubio Mc

Papers

Fuchsin fluorescence and autofluorescence in Cryptosporidium, Isospora and Cyclospora oocysts

Evaluation of an immunochromatographic dip-strip test for the detection of Cryptosporidium oocysts in stool specimens.

Use of a Selective Medium and a Membrane Filter Method for Isolation of Campylobacter Species from Spanish Paediatric Patients

Astrovirus infection among children with gastroenteritis in the city of Zaragoza, Spain.

[Epidemiology of shigellosis and colicin typing of Shigella sonnei. A 14-year study].