/pdf/a-framework-for-biosensors-assisted-by-multiphoton-effects-2ww4xo0t.pdf

A Framework for Biosensors Assisted by Multiphoton Effects and Machine Learning

Abstract A new type of spectrometer that heavily relies on computational technique to recover spectral information is introduced. They are different from conventional optical spectrometers in many important aspects. Traditional spectrometers offer high spectral resolution and wide spectral range, but they are so bulky and expensive as to be difficult to deploy broadly in the field. Emerging applications in machine sensing and imaging require low-cost miniaturized spectrometers that are specifically designed for certain applications. Computational spectrometers are well suited for these applications. They are generally low in cost and offer single-shot operation, with adequate spectral and spatial resolution. The new type of spectrometer combines recent progress in nanophotonics, advanced signal processing and machine learning. Here we review the recent progress in computational spectrometers, identify key challenges, and note new directions likely to develop in the near future.

/pdf/computational-spectrometers-enabled-by-nanophotonics-and-23cad9t9.pdf

Computational spectrometers enabled by nanophotonics and deep learning

Advancement of materials along with their fascinating properties play increasingly important role in facilitating the rapid progress in medicine. An excellent example is the recent development of biosensors based on nanomaterials that induce surface plasmon effect for screening biomarkers of various diseases ranging from cancer to Covid-19. The recent global pandemic re-confirmed the trend of real-time diagnosis in public health to be in point-of-care (POC) settings that can screen interested biomarkers at home, or literally anywhere else, at any time. Plasmonic biosensors, thanks to its versatile designs and extraordinary sensitivities, can be scaled into small and portable devices for POC diagnostic tools. In the meantime, efforts are being made to speed up, simplify and lower the cost of the signal readout process including converting the conventional heavy laboratory instruments into lightweight handheld devices. This article reviews the recent progress on the design of plasmonic nanomaterial-based biosensors for biomarker detection with a perspective of POC applications. After briefly introducing the plasmonic detection working mechanisms and devices, the selected highlights in the field focusing on the technology's design including nanomaterials development, structure assembly, and target applications are presented and analyzed. In parallel, discussions on the sensor's current or potential applicability in POC diagnosis are provided. Finally, challenges and opportunities in plasmonic biosensor for biomarker detection, such as the current Covid-19 pandemic and its testing using plasmonic biosensor and incorporation of machine learning algorithms are discussed. 

https://doi.org/10.1016/j.mtbio.2022.100263

Plasmonic nanosensors for point-of-care biomarker detection

Weak reactions are usually overlooked due to weak detectable features and susceptibility to interference from noise signals. Strategies for detecting weak reactions are essential for exploring reaction mechanisms and exploiting potential applications. Machine learning has recently been successfully used to identify patterns and trends in the data. Here, it is demonstrated that machine learning-based techniques can offer accurate local surface plasmon resonance (LSPR) scatterometry by improving the precision of the plasmonic scattering imaging in weak chemical reactions. Dark-field microscopy (DFM) imaging technique is the most effective method for high-sensitivity plasmonic nanoparticles LSPR scatterometry. Unfortunately, deviations caused by the instrument and operating errors are inevitable, and it is difficult to effectively detect the presence of weak reactions. Thus, introducing a machine learning calibration model to automatically calibrate the scattering signal of the nanoprobe in the reaction process can greatly improve the confidence of LSPR scatterometry under DFM imaging and allow DFM imaging to effectively monitor unobvious or weak reactions. By this approach, the weak oxidation of silver nanoparticles (AgNPs) in water by dissolved oxygen was successfully monitored. Moreover, a trivial reaction between AgNPs and mercury ions was detected in a dilute mercury solution with a concentration greater than 1.0 × 10-10 mol/L. These results suggest the great potential of the combination of LSPR scatterometry and machine learning as a method for imaging analysis and intelligent sensing.

Weak Reaction Scatterometry of Plasmonic Resonance Light Scattering with Machine Learning.

Recent Advances in Plasmonic Nanostructures Applied for Label-free Single-cell Analysis

Plasmonic nanoparticles, which have excellent local surface plasmon resonance (LSPR) optical and chemical properties, have been widely used in biology, chemistry, and photonics. The single-particle light scattering dark-field microscopy (DFM) imaging technique based on a color-coded analytical method is a promising approach for high-throughput plasmonic nanoparticle scatterometry. Due to the interference of high noise levels, accurately extracting real scattering light of plasmonic nanoparticles in living cells is still a challenging task, which hinders its application for intracellular analysis. Herein, we propose an automatic and high-throughput LSPR scatterometry technique using a U-Net convolutional deep learning neural network. We use the deep neural networks to recognize the scattering light of nanoparticles from background interference signals in living cells, which have a dynamic and complicated environment, and construct a DFM image semantic analytical model based on the U-Net convolutional neural network. Compared with traditional methods, this method can achieve higher accuracy, stronger generalization ability, and robustness. As a proof of concept, the change of intracellular cytochrome c in MCF-7 cells under UV light-induced apoptosis was monitored through the fast and high-throughput analysis of the plasmonic nanoparticle scattering light, providing a new strategy for scatterometry study and imaging analysis in chemistry.

Shan Xiong Chen

Papers

Automated Plasmonic Resonance Scattering Imaging Analysis via Deep Learning.