V
Vasily Tcherepanov
Researcher at University of Victoria
Publications - 6
Citations - 731
Vasily Tcherepanov is an academic researcher from University of Victoria. The author has contributed to research in topics: Genome & DNA sequencing. The author has an hindex of 6, co-authored 6 publications receiving 625 citations.
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Comparison of the genome sequences of non-pathogenic and pathogenic African swine fever virus isolates.
TL;DR: The genomic coding sequences, apart from the inverted terminal repeats and cross-links, have been determined for two African swine fever virus isolates from the same virus genotype, a non-pathogenic isolate from Portugal, OURT88/3, and a highly pathogenic isolation from West Africa, Benin 97/1.
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Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.
TL;DR: GATU greatly simplifies the initial stages of genome annotation by using a closely related genome as a reference and significantly reduces the time required for annotation of genes and mature peptides as well as helping to standardize gene names between related organisms.
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Comparative genomic analysis of the family Iridoviridae : re-annotating and defining the core set of iridovirus genes
TL;DR: The re-analysis of genomes within the Iridoviridae family provides a unifying framework to understand the biology of these viruses, and further re-defining the core set of iridovirus genes will continue to lead to a better understanding of the phylogenetic relationships between individual irids.
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Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
TL;DR: Base-By-Base enables users to quickly and easily compare large viral genomes and highlights small differences that may be responsible for important phenotypic differences such as virulence.
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GraphDNA: a Java program for graphical display of DNA composition analyses.
TL;DR: GraphDNA is a platform-independent, Open Source tool for the analysis of nucleotide trends in DNA sequences that displays multiple DNA nucleotide composition graphs (skews and walks) in a single window to allow direct comparisons between the sequences.