Y
Yi Liu
Researcher at Genomics Institute of the Novartis Research Foundation
Publications - 26
Citations - 3153
Yi Liu is an academic researcher from Genomics Institute of the Novartis Research Foundation. The author has contributed to research in topics: Kinase & Internal medicine. The author has an hindex of 19, co-authored 22 publications receiving 2905 citations.
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Journal ArticleDOI
Rational design of inhibitors that bind to inactive kinase conformations
Yi Liu,Nathanael S. Gray +1 more
TL;DR: A structural analysis of binding modes of known human type II inhibitors are presented and it is demonstrated that they conform to a pharmacophore model that is currently being used to design a new generation of kinase inhibitors.
Journal ArticleDOI
Identification of NVP-TAE684, a potent, selective, and efficacious inhibitor of NPM-ALK
Anna Galkin,Jonathan S. Melnick,Sungjoon Kim,Tami Hood,Nanxin Li,Lintong Li,Gang Xia,Ruo Steensma,Chopiuk Greg,Jiqing Jiang,Yongqin Wan,Peter Ding,Yi Liu,Fangxian Sun,Peter G. Schultz,Nathanael S. Gray,Markus Warmuth +16 more
TL;DR: A highly potent and selective small-molecule ALK inhibitor, NVP-TAE684, which blocked the growth of ALCL-derived and ALK-dependent cell lines with IC50 values between 2 and 10 nM and induced down-regulation of CD30 expression, suggesting that CD30 may be used as a biomarker of therapeutic NPM-ALK kinase activity inhibition.
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Allosteric inhibitors of Bcr-abl–dependent cell proliferation
Francisco Adrian,Qiang Ding,Taebo Sim,Anastasia Velentza,Christine Sloan,Yi Liu,Guobao Zhang,Wooyoung Hur,Sheng Ding,Paul W. Manley,Jürgen Mestan,Doriano Fabbro,Nathanael S. Gray +12 more
TL;DR: The discovery of a new class of Bcr-abl inhibitors is reported using an unbiased differential cytotoxicity screen of a combinatorial kinase-directed heterocycle library and it is proposed that this newclass of compounds inhibits BCr-abl kinase activity through an allosteric non-ATP competitive mechanism.
Journal ArticleDOI
Exploration of type II binding mode: A privileged approach for kinase inhibitor focused drug discovery?
Zheng Zhao,Hong Wu,Hong Wu,Li Wang,Yi Liu,Stefan Knapp,Qingsong Liu,Qingsong Liu,Nathanael S. Gray +8 more
TL;DR: This review surveys the large number of type II inhibitors that have been developed and provides an analysis of their crystallographically determined binding modes, and demonstrates that more than 200 kinases can be targeted.
Journal ArticleDOI
A general strategy for creating "inactive-conformation" abl inhibitors
Barun Okram,Advait Nagle,Francisco Adrian,Christian C. Lee,Pingda Ren,Xia Wang,Taebo Sim,Yongping Xie,Xing Wang,Gang Xia,Glen Spraggon,Markus Warmuth,Yi Liu,Nathanael S. Gray,Nathanael S. Gray +14 more
TL;DR: A general pharmacophore model of type II inhibition is described that enables a rational "hybrid-design" approach whereby a 3-trifluoromethylbenzamide functionality is appended to four distinct type I scaffolds in order to convert them into their corresponding type II counterparts.