A
Akinori Yabuki
Researcher at Japan Agency for Marine-Earth Science and Technology
Publications - 67
Citations - 1395
Akinori Yabuki is an academic researcher from Japan Agency for Marine-Earth Science and Technology. The author has contributed to research in topics: Phylogenetic tree & Phylogenetics. The author has an hindex of 21, co-authored 56 publications receiving 1142 citations. Previous affiliations of Akinori Yabuki include University of Oxford & University of Tsukuba.
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Journal ArticleDOI
Phylogeny of novel naked Filose and Reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea revised.
David Bass,Ema E. Y. Chao,Sergey Nikolaev,Akinori Yabuki,Ken-ichiro Ishida,Cédric Berney,Ursula Pakzad,Claudia Wylezich,Claudia Wylezich,Thomas Cavalier-Smith +9 more
TL;DR: The classically mainly reticulose Proteomyxidea to Endomyxa is transferred, removing evident filosans as new class Granofilosea (including Desmothoracida, Acinetactis and new heliomonad family Heliomorphidae (new genus Heliomorpha (=Dimorpha)).
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Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group.
Matthew Brown,Aaron A. Heiss,Ryoma Kamikawa,Yuji Inagaki,Akinori Yabuki,Alexander K. Tice,Takashi Shiratori,Ken-ichiro Ishida,Tetsuo Hashimoto,Simpson Agb,Andrew J. Roger +10 more
TL;DR: CRuMs and ancyromonads represent two distinct major groups that branch deeply on the lineage that includes animals, near the most commonly inferred root of the eukaryote tree, which makes both groups crucial in examinations of the deepest-level history of extant eucaryotes.
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Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes
Michelle M. Leger,Martin Kolisko,Ryoma Kamikawa,Courtney W. Stairs,Keitaro Kume,Ivan Čepička,Jeffrey D. Silberman,Jan Andersson,Feifei Xu,Akinori Yabuki,Laura Eme,Qianqian Zhang,Kiyotaka Takishita,Yuji Inagaki,Alastair G. B. Simpson,Tetsuo Hashimoto,Andrew J. Roger +16 more
TL;DR: A large-scale comparative transcriptomic study of MROs across a major eukaryotic group, Metamonada, examining lineage-specific gain and loss of metabolic functions in the Mros of Trichomonas, Giardia, Spironucleus and their free-living relatives uncovers a complex history of ATP production machinery in diplomonads such as GiardIA, and their closest relative, Dysnectes.
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Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista.
Akinori Yabuki,Ryoma Kamikawa,Sohta A. Ishikawa,Martin Kolisko,Eunsoo Kim,Akifumi S. Tanabe,Keitaro Kume,Ken-ichiro Ishida,Yuji Inagki +8 more
TL;DR: The taxonomic assignment of P. bilix, and character evolution in Cryptista is discussed, which was found to be basal to a clade of cryptophytes, goniomonads and kathablepharids collectively known as Cryptista, which is proposed to be a part of the larger taxonomic assemblage Hacrobia.
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Green-colored plastids in the dinoflagellate genus Lepidodinium are of core chlorophyte origin.
Takuya Matsumoto,Fumihiko Shinozaki,Tomoko Chikuni,Akinori Yabuki,Kiyotaka Takishita,Masanobu Kawachi,Takeshi Nakayama,Isao Inouye,Tetsuo Hashimoto,Yuji Inagaki +9 more
TL;DR: It is proposed that Lepidodiniumplastids are of core chlorophyte origin, and 85 sequences newly determined in this study and recent progress in plastid genome sequencing enabled us to prepare an alignment comprised of 11Plastid proteins from green algal taxa that appropriately cover the diversity of Chlorophyta.