scispace - formally typeset
A

Andrea Koblížková

Researcher at Academy of Sciences of the Czech Republic

Publications -  28
Citations -  1825

Andrea Koblížková is an academic researcher from Academy of Sciences of the Czech Republic. The author has contributed to research in topics: Satellite DNA & Genome. The author has an hindex of 20, co-authored 25 publications receiving 1427 citations.

Papers
More filters
Journal ArticleDOI

Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution

TL;DR: The presence of two distinct types of centromeres, coupled with the boom-and-bust cycles of centromeric satellite repeats in Solanum species, suggests that repeat-based centromere evolution can rapidly evolve from neocentromeres by de novo amplification and insertion of satellite repeat repeats in the CENH3 domains.
Journal ArticleDOI

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

TL;DR: A novel computational pipeline that circumvents the problem of difficult to assemble satellite DNA characterization by detecting satellite repeats directly from unassembled short reads by employing graph-based sequence clustering to identify groups of reads that represent repetitive elements.
Journal ArticleDOI

Plant centromeric retrotransposons: a structural and cytogenetic perspective

TL;DR: Comprehensive analysis of the CRM clade elements showed that genuinely centromeric retrotransposons represent an active component of centromeres of a wide range of angiosperm species, implying that they play an important role in plant centromere evolution.
Journal ArticleDOI

In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.

TL;DR: Large-scale comparative analysis of repeats in 23 species from four genera of the monophyletic legume tribe Fabeae, representing a 7.6-fold variation in genome size, provided a proof of concept for the approach combining recent developments in sequencing and bioinformatics to perform comparative analyses of repetitive DNAs in a large number of non-model species without the need to assemble their genomes.
Journal ArticleDOI

Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains

TL;DR: It is shown that pea (Pisum sativum) chromosomes exhibit remarkably long primary constrictions that contain 3–5 explicit CenH3-containing regions, a novelty in centromere organization.