E
Erik M. van Mulligen
Researcher at Erasmus University Medical Center
Publications - 85
Citations - 10456
Erik M. van Mulligen is an academic researcher from Erasmus University Medical Center. The author has contributed to research in topics: Unified Medical Language System & Annotation. The author has an hindex of 31, co-authored 81 publications receiving 7247 citations. Previous affiliations of Erik M. van Mulligen include Nanyang Technological University & Erasmus University Rotterdam.
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Creating multilingual gold standard corpora for biomedical concept recognition
Jan A. Kors,Simon Clematide,Saber A. Akhondi,Erik M. van Mulligen,Dietrich Rebholz-Schuhmann +4 more
TL;DR: This work describes the approach to create gold standard corpora for biomedical concept recognition in multiple languages, including English, French, German, Spanish, and Dutch, based on a subset of the Unified Medical Language System.
Proceedings Article
Mining Microarray Datasets Aided by Knowledge Stored in Literature
Rob Jelier,Guido Jenster,Lambert C. J. Dorssers,Erik M. van Mulligen,Barend Mons,Jan A. Kors +5 more
TL;DR: This work presents an approach to use background information on genes for DNA microarray data mining, and shows that most information is stored in free text.
Journal ArticleDOI
Identifying genes targeted by disease-associated non-coding SNPs with a protein knowledge graph
TL;DR: Whether protein knowledge graphs can be used to identify genes that are targeted by disease-associated non-coding SNPs is explored by testing and comparing the performance of six existing methods for a protein knowledge graph, four of which were developed for disease gene identification.
Journal ArticleDOI
eTRANSAFE: data science to empower translational safety assessment.
Ferran Sanz,Francois Pognan,Thomas Steger-Hartmann,Carlos Diaz,Shoji Asakura,Alexander Amberg,Nathalie Becourt-Lhote,Niklas Blomberg,Nicolas Bosc,Katharine Briggs,Frank Bringezu,Claire Brulle-Wohlhueter,Søren Brunak,Ruud R.G. Bueters,Giulia Callegaro,Salvador Capella-Gutierrez,Emilio Centeno,Javier Corvi,Mark T. D. Cronin,Philip Drew,Guillemette Duchateau-Nguyen,Gerhard F. Ecker,Sylvia Escher,Eloy Felix,Markus Frericks,Laura I Furlong,R. Geiger,Catherine S. George,Melanie Grandits,J Kilgour-Christie,T. Kiziloren,Jan A. Kors,Naoki Koyama,Annika Kreuchwig,Andrew R. Leach,Miguel Angel Mayer,Peter Monecke,Wolfgang Muster,Chihiro Miyamoto Nakazawa,Gavin Nicholson,Rowan Parry,Manual Pastor,Janet Piñero,Nils Oberhauser,Juan Manuel Ramírez-Anguita,Adriá Rosat Rodrigo,Aljoša Smajić,Markus Schaefer,Sebastian rer. nat. Schieferdecker,E Terricabras,Panuwat Trairatphisan,Sean Turner,Alfonso Valencia,B. Van De Water,J. Van der Lei,Erik M. van Mulligen,Esther Vock,David Wilkinson +57 more
A concept annotation system for clinical records
Ning Kang,Rogier Barendse,Zubair Afzal,Bharat Singh,Martijn J. Schuemie,Erik M. van Mulligen,Jan A. Kors +6 more
TL;DR: This study presents a system developed for the annotation of medical concepts, including medical problems, tests, and treatments, mentioned in clinical records, which is the first publicly available clinical record concept annotation system.