Virus Diseases of Peanut

This is a continuation of the papers “Towards a classification of Sordariomycetes” (2015) and “Families of Sordariomycetes” (2016) in which we compile a treatment of the class Sordariomycetes. The present treatment is needed as our knowledge has rapidly increased, from 32 orders, 105 families and 1331 genera in 2016, to 45 orders, 167 families and 1499 genera (with 308 genera incertae sedis) at the time of publication. In this treatment we provide notes on each order, families and short notes on each genus. We provide up-to-date DNA based phylogenies for 45 orders and 163 families. Three new genera and 16 new species are introduced with illustrations and descriptions, while 23 new records and three new species combinations are provided. We also list 308 taxa in Sordariomycetes genera incertae sedis. For each family we provide general descriptions and illustrate the type genus or another genus, the latter where the placement has generally been confirmed with molecular data. Both the sexual and asexual morphs representative of a family are illustrated where available. Notes on ecological and economic considerations are also given.

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Refined families of Sordariomycetes

Colletotrichum is an economically important plant pathogenic genus worldwide, but can also have endophytic or saprobic lifestyles. The genus has undergone numerous revisions in the past decades with the addition, typification and synonymy of many species. In this study, we provide an account of the 190 currently accepted species, one doubtful species and one excluded species that have molecular data. Species are listed alphabetically and annotated with their habit, host and geographic distribution, phylogenetic position, their sexual morphs and uses (if there are any known). There are eleven species complexes in Colletotrichum and 23 singleton species. The main characters of each species complex are detailed with illustrations. Phylogenetic trees are provided for the whole genus and each species complex. Genes and combination of genes that can be used for identification of the species complexes are suggested. Specific genes that can be used in species identification are given when possible.

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Notes on currently accepted species of Colletotrichum

The taxonomy of the genus Colletotrichum has undergone tremendous changes over the last decade, with over 200 species being currently recognised and species complexes being informally used to cluster those species. Many of these species are important plant pathogens, some rather polyphagous and others host-specific, but several occur seldomly and some may in fact be ecologically endangered. Based mainly on literature from the past decade, in this work we review the occurrence, geographic distribution and host spectrum of currently recognised Colletotrichum species under phylogenetic, pathological/agronomic and ecological perspectives, providing a list arranged by Colletotrichum species and species complexes. A total of 257 species are listed and grouped into 15 species complexes. In this work we have recorded 1353 unique host species-Colletotrichum species association records from 720 hosts, with the Fabaceae as the family with higher number of hosts (52 host species) but with the Rosaceae as the family with the highest number of host species-Colletotrichum species association records (118 association records). According to occurrence data, 88 species are common in nature, 128 were considered as data deficient and 41 are threatened, some of which are likely extinct from nature and preserved only in culture collections. Several species are relevant plant pathogens, in some cases geographically confined and thus of potential quarantine relevance. Based on the major changes that occurred on Colletotrichum taxonomy over the last decade, this work provides a comprehensive overview of occurrence data of Colletotrichum species, compiling host range and geographical distribution, with relevance for plant pathology and conservation mycology. The current taxonomic framework in Colletotrichum is revealing numerous species but poses challenges to the employment of standard criteria for the evaluation of biological conservation of these fungi. We advocate that conservation mycology and taxonomy should find common routes simultaneously enabling the correct delimitation of species of Colletotrichum and the implementation of feasible criteria for the evaluation of conservation. The employment of new technologies, such whole genome sequencing (WGS), will help and support the description of new species and to gain a better understanding of the genetic bases of speciation processes.

Colletotrichum species and complexes: geographic distribution, host range and conservation status

Foliar pathogens of eucalypts

Anthracnose is major disease of pepper (Capsicum annum) in the tropics and causes severe damage both in the field and postharvest. In Brazil, this disease is caused by Colletotrichum acutatum, C. boninense, C. capsici, C. coccodes, and C. gloeosporioides, where the first species is responsible for 70% of all occurrences (3). Recently, C. acutatum has been considered a species complex (1); thus, the aim of this study was to verify the etiology of anthracnose on peppers using a morphological and molecular approaches. In 2011, pepper fruits with typical symptoms of anthracnose (dark, sunken spots with concentric rings of orange conidial masses) were collected in Vicosa, Minas Gerais, Brazil. A single spore isolate was obtained on potato dextrose agar (PDA), and the derived culture was deposited in the Colecao de Culturas de Fungos Fitopatogenicos “Prof. Maria Menezes” (code CMM-4200). The upper side colonies on PDA were gray, cotton-like, and pale gray to pale orange. Conidia were hyaline, aseptate, smooth, ...

First Report of Anthracnose on Pepper Fruit Caused by Colletotrichum scovillei in Brazil

In the summer of 2011, in a nursery located in Vicosa City, Minas Gerais State, brownish, necrotic, irregular spots were observed on leaves of Mabea fistulifera Mart. (Euphorbiaceae), an indigenous forest species commonly found in Brazil. Around 6,300 seedlings were evaluated and as many as 60% of them showed disease symptoms, including severe defoliation and plant death. Leaves with coalescing lesions turned papery in texture and had a blighted appearance. Bacterial colonies were isolated from these symptomatic leaves on King B's medium and identified based on biochemical and molecular analysis, as a member of the Enterobacteriaceae family. Like other members of the Enterobacteriaceae family, the bacteria were facultative anaerobic, gram-negative, cream-colored on YDC medium, urease and oxidase negative, as well as catalase and asparagine positive. Bacterial DNA was extracted from pure culture grown overnight in liquid 523 medium at 28°C using the Wizard Genomic DNA Purification kit (Promega) and conserv...

First Report of Enterobacter cowanii Causing Bacterial Spot on Mabea fistulifera, a Native Forest Species in Brazil.

Eucalyptus plantations cover approximately 5.1 million hectares of Brazil, an area that will likely increase given the demand for natural products from planted forests. In recent years, anthracnose diseases have been frequently found on eucalyptus in Brazilian nurseries. In 2012, rooted mini-cuttings of clones of E. urophylla x E. grandis ("urograndis") exhibiting leaf spot and stem girdling symptoms were collected from nurseries in the Brazilian states of Para and Minas Gerais, and cultures of Colletotrichum were obtained from the lesions. The isolates were initially identified to species of the C. gloeosporioides species complex, according to searches of the Q-bank Fungi database with the DNA sequences of their internal transcribed spacer (ITS) regions. Subsequent phylogenetic analysis of the β-tubulin (TUB2) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) regions, combined with morphological characterization, allowed us to conclude that the fungus belongs to C. theobromicola. Conidial suspension sprayed on "urograndis" clone plants induced similar symptoms as those found under natural conditions. Re-isolation of the fungus from symptomatic plants fulfilled the Koch´s postulate. To our knowledge, this is the first report of C. theobromicola in Brazil.

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Colletotrichum theobromicola causes defoliation, stem girdling and death of mini-cuttings of eucalyptus in Brazil

This study aimed to elucidate the infection process of Botrytis cinerea on eucalypt leaves. Tests were conducted to evaluate the influence of leaf side (adaxial or abaxial), leaf age and luminosity on conidial germination, appressorium formation and grey mould (GM) severity. The adaxial and abaxial surfaces of detached eucalypt leaves were inoculated with a conidial suspension of B. cinerea and kept under constant light or dark. Subsequently, the adaxial surface of young and old leaves was inoculated and kept in the dark. To evaluate the percentage of conidia germination and appressorium formation, leaf samples were collected 6 hours after inoculation (hai), clarified (alcohol and chloral hydrate) and evaluated under a light microscope. The severity of GM was assessed 10 days after inoculation. For scanning electron microscopy analysis, samples were collected from 2 to 168 hai. A higher percentage of conidia germination (92%) and GM severity (21%) occurred on the adaxial surfaces of leaves kept in the dark. There was no statistical difference between the surfaces of young and old leaves for conidia germination. No appressorium was formed by B. cinerea. The GM severity on young leaves (17.3%) was 34 times higher than on old leaves (0.5%). The micrographs showed germinating conidia emitting 1–4 germ tubes in samples at 4 hai. The fungus penetration occurred through intact leaf surfaces, and both extra- and intracellular colonization of the mesophyll cells by the hyphae of the pathogen were observed at 120 hai. Sporulation occurred on the adaxial and abaxial surfaces (macronematous conidiophores) and below the epidermis (micronematous conidiophores).

Infection Process of Botrytis cinerea on Eucalypt Leaves

The objective of the present study was to determine the transport rate of a fungus population associated with Jatropha curcas seeds and the pathogenicity of these microrganisms to seedlings and fruit and also the fruit-seed and seed-seedling transmissibility. The transport rate of seeds produced in Minas Gerais, Sao Paulo, Bahia and Tocantins states was evaluated using the blotter test. The seeds were submitted to the following treatments: without disinfestation, with tegument (SDCT), without disinfestation, without tegument (SDST), with disinfestation, with tegument (CDCT) and with disinfestations, without tegument (CDST). The incidence (%) of the fungi was assessed using a binocular stereomicroscope. Suspensions of 106 spores and PDA discs with mycelium were inoculated for the pathogenicity tests on seedlings and fruits, respectively. For the phytopathogenic fungi, the fruit-seed and seed-seedling transmissibility were evaluated. The SDCT treatment allowed the detection of a greater number of fungi. The identified fungi were Colletotrichum gloeosporioides, C. capsici, Curvularia sp., Verticillium sp., Fusarium sp., Penicillium sp., Aspergillus sp., A. Niger, Rhizopus sp. Only the Colletotrichum species is pathogenic to seedlings and fruit. For both species there is fruit-seed transmissibility but no seed-seedling transmission.

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G. Q. Furtado

Papers

First Report of Anthracnose on Pepper Fruit Caused by Colletotrichum scovillei in Brazil

First Report of Enterobacter cowanii Causing Bacterial Spot on Mabea fistulifera, a Native Forest Species in Brazil.

Colletotrichum theobromicola causes defoliation, stem girdling and death of mini-cuttings of eucalyptus in Brazil

Infection Process of Botrytis cinerea on Eucalypt Leaves

Transport, pathogenicity and transmissibility of fungi associated with physic nut seeds