G
Gianluca Prezza
Publications - 6
Citations - 43
Gianluca Prezza is an academic researcher. The author has contributed to research in topics: Bacteroides thetaiotaomicron & Bacteroides. The author has an hindex of 2, co-authored 3 publications receiving 16 citations.
Papers
More filters
Journal ArticleDOI
Improved bacterial RNA-seq by Cas9-based depletion of ribosomal RNA reads
Gianluca Prezza,Tobias Heckel,Sascha Dietrich,Christina Homberger,Alexander J. Westermann,Jörg Vogel +5 more
TL;DR: DASH (Depletion of Abundant Sequences by Hybridization), initially developed for eukaryotic cells, is adopted to improve both the sensitivity and depth of bacterial RNA-seq and is an attractive alternative to rRNA removal protocols for material-constrained studies where conventional ribodepletion techniques fail.
Journal ArticleDOI
An RNA-centric view on gut Bacteroidetes.
TL;DR: This review presents a guide to RNA-based regulatory mechanisms in the phylum Bacteroidetes, focusing on the most abundant bacterial genus in the human gut, Bacteroides spp, and predicts mechanistic and functional commonalities and differences between Bactroides sRNAs and those of other model bacteria.
Journal ArticleDOI
Comparative genomics provides structural and functional insights into Bacteroides RNA biology
Gianluca Prezza,Daniel Ryan,Gohar Mädler,Sarah Reichardt,Lars Barquist,Alexander J. Westermann +5 more
TL;DR: In this paper, a comparative genomics approach was used to investigate RNA biology in an understudied gut bacterium, using Bacteroides thetaiotaomicron as a representative microbiota member.
Posted ContentDOI
An integrated transcriptomics–functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines
Daniel Ryan,Elise Bornet,Gianluca Prezza,Shuba Varshini Alampalli,Taís Franco de Carvalho,Hannah Felchle,Titus Ebbecke,Regan J. Hayward,Adam M. Deutschbauer,Lars Barquist,Alexander J. Westermann +10 more
TL;DR: In this paper , the authors map transcriptional units and profile their expression levels in Bacteroides thetaiotaomicron over a suite of 15 defined experimental conditions that are relevant in vivo, such as variation of temperature, pH, and oxygen tension, exposure to antibiotic stress, and growth on simple carbohydrates or on host mucin derived glycans.