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Showing papers by "Jake Vanderplas published in 2016"




Journal ArticleDOI
TL;DR: This package contains a Python implementation of a clustering algorithm based on an efficiently-constructed approximate Euclidean minimum spanning tree that produces a Hierarchical clustering of input data, and is quite similar to single-linkage Agglomerative clustering.
Abstract: This package contains a Python implementation of a clustering algorithm based on an efficiently-constructed approximate Euclidean minimum spanning tree (described in (Ivezić et al. 2014)). The method produces a Hierarchical clustering of input data, and is quite similar to single-linkage Agglomerative clustering. The advantage of this implementation is the ability to find significant clusters even in the presence of background noise, and is particularly useful for researchers hoping to detect structure in physical data.

8 citations


Journal ArticleDOI
TL;DR: Cluster-lensing as discussed by the authors is a pure-Python package for calculating properties of galaxy clusters, including NFW halo profiles with and without the effects of cluster miscentering.
Abstract: We describe a new open source package for calculating properties of galaxy clusters, including NFW halo profiles with and without the effects of cluster miscentering. This pure-Python package, cluster-lensing, provides well-documented and easy-to-use classes and functions for calculating cluster scaling relations, including mass-richness and mass-concentration relations from the literature, as well as the surface mass density $\Sigma(R)$ and differential surface mass density $\Delta\Sigma(R)$ profiles, probed by weak lensing magnification and shear. Galaxy cluster miscentering is especially a concern for stacked weak lensing shear studies of galaxy clusters, where offsets between the assumed and the true underlying matter distribution can lead to a significant bias in the mass estimates if not accounted for. This software has been developed and released in a public GitHub repository, and is licensed under the permissive MIT license. The cluster-lensing package is archived on Zenodo (Ford 2016). Full documentation, source code, and installation instructions are available at this http URL.

6 citations


Journal ArticleDOI
TL;DR: Cluster-Lensing as discussed by the authors is a pure-Python package for calculating properties of galaxy clusters, including Navarro, Frenk, and White halo profiles with and without the effects of cluster miscentering.
Abstract: We describe a new open source package for calculating properties of galaxy clusters, including Navarro, Frenk, and White halo profiles with and without the effects of cluster miscentering. This pure-Python package, cluster-lensing, provides well-documented and easy-to-use classes and functions for calculating cluster scaling relations, including mass-richness and mass-concentration relations from the literature, as well as the surface mass density and differential surface mass density profiles, probed by weak lensing magnification and shear. Galaxy cluster miscentering is especially a concern for stacked weak lensing shear studies of galaxy clusters, where offsets between the assumed and the true underlying matter distribution can lead to a significant bias in the mass estimates if not accounted for. This software has been developed and released in a public GitHub repository, and is licensed under the permissive MIT license. The cluster-lensing package is archived on Zenodo. Full documentation, source code, and installation instructions are available at http://jesford.github.io/cluster-lensing/.

6 citations