We live amid a global wave of anthropogenically driven biodiversity loss: species and population extirpations and, critically, declines in local species abundance. Particularly, human impacts on animal biodiversity are an under-recognized form of global environmental change. Among terrestrial vertebrates, 322 species have become extinct since 1500, and populations of the remaining species show 25% average decline in abundance. Invertebrate patterns are equally dire: 67% of monitored populations show 45% mean abundance decline. Such animal declines will cascade onto ecosystem functioning and human well-being. Much remains unknown about this “Anthropocene defaunation”; these knowledge gaps hinder our capacity to predict and limit defaunation impacts. Clearly, however, defaunation is both a pervasive component of the planet’s sixth mass extinction and also a major driver of global ecological change.

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Defaunation in the Anthropocene

Summary
1. Biological invasions are numerous in fresh waters around the world. At least hundreds of freshwater species have been moved outside of their native ranges by vectors such as ballast water, canals, deliberate introductions, and releases from aquaria, gardens, and bait buckets. As a result, many bodies of fresh water now contain dozens of alien species.

2. Invasions are highly nonrandom with respect to the taxonomic identity and biological traits of the invaders, the ecological characteristics of the ecosystems that are invaded, and the geographical location of the ecosystems that supply and receive the invaders.

3. Some invaders have had deep and pervasive effects on the ecosystems that they invade. Classes of ecologically important invaders in fresh waters include molluscs that are primary consumers and disrupt the food web from its base, fishes that disrupt the food web from its apex or centre, decapods that act as powerful omnivores, aquatic plants that have strong engineering effects and affect the quality and quantity of primary production, and diseases, which probably have been underestimated as an ecological force.

4. The number of alien species in freshwater ecosystems will increase in the future as new aliens are moved outside of their native ranges by humans, and as established aliens fill their potential ranges. Alien species create “no-analogue” ecosystems that will be difficult to manage in the future. We may be able to reduce future impacts of invaders by making more serious efforts to prevent new invasions and manage existing invaders.

5. Thematic implications: interactions between alien species and other contemporary stressors of freshwater ecosystems are strong and varied. Because disturbance is generally thought to favour invasions, stressed ecosystems may be especially susceptible to invasions, as are highly artificial ecosystems. In turn, alien species can strongly alter the hydrology, biogeochemical cycling, and biotic composition of invaded ecosystems, and thus modulate the effects of other stressors. In general, interactions between alien species and other stressors are poorly studied.

/pdf/alien-species-in-fresh-waters-ecological-effects-5fvv6usa04.pdf

Alien species in fresh waters: ecological effects, interactions with other stressors, and prospects for the future

The majority of studies on environmental change focus on the response of single species and neglect fundamental biotic interactions, such as mutualism, competition, predation, and parasitism, which complicate patterns of species persistence. Under global warming, disruption of community interactions can arise when species differ in their sensitivity to rising temperature, leading to mismatched phenologies and/or dispersal patterns. To study species persistence under global climate change, it is critical to consider the ecology and evolution of multispecies interactions; however, the sheer number of potential interactions makes a full study of all interactions unfeasible. One mechanistic approach to solving the problem of complicated community context to global change is to (i) define strategy groups of species based on life-history traits, trophic position, or location in the ecosystem, (ii) identify species involved in key interactions within these groups, and (iii) determine from the interactions of these key species which traits to study in order to understand the response to global warming. We review the importance of multispecies interactions looking at two trait categories: thermal sensitivity of metabolic rate and associated lifehistory traits and dispersal traits of species. A survey of published literature shows pronounced and consistent differences among trophic groups in thermal sensitivity of lifehistory traits and in dispersal distances. Our approach increases the feasibility of unraveling such a large and diverse set of community interactions, with the ultimate goal of improving our understanding of community responses to global warming.

Adapt or disperse: understanding species persistence in a changing world

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Tadpoles: the biology of anuran larvae

Stream ecosystems harbor many secretive and imperiled species, and studies of vertebrates in these systems face the challenges of relatively low detection rates and high costs. Environmental DNA (eDNA) has recently been confirmed as a sensitive and efficient tool for documenting aquatic vertebrates in wetlands and in a large river and canal system. However, it was unclear whether this tool could be used to detect low-density vertebrates in fast-moving streams where shed cells may travel rapidly away from their source. To evaluate the potential utility of eDNA techniques in stream systems, we designed targeted primers to amplify a short, species-specific DNA fragment for two secretive stream amphibian species in the northwestern region of the United States (Rocky Mountain tailed frogs, Ascaphus montanus, and Idaho giant salamanders, Dicamptodon aterrimus). We tested three DNA extraction and five PCR protocols to determine whether we could detect eDNA of these species in filtered water samples from five streams with varying densities of these species in central Idaho, USA. We successfully amplified and sequenced the targeted DNA regions for both species from stream water filter samples. We detected Idaho giant salamanders in all samples and Rocky Mountain tailed frogs in four of five streams and found some indication that these species are more difficult to detect using eDNA in early spring than in early fall. While the sensitivity of this method across taxa remains to be determined, the use of eDNA could revolutionize surveys for rare and invasive stream species. With this study, the utility of eDNA techniques for detecting aquatic vertebrates has been demonstrated across the majority of freshwater systems, setting the stage for an innovative transformation in approaches for aquatic research.

/pdf/molecular-detection-of-vertebrates-in-stream-water-a-5dymfd47ik.pdf

Molecular detection of vertebrates in stream water: a demonstration using Rocky Mountain tailed frogs and Idaho giant salamanders.

Amphibians can be important consumers in both aquatic and terrestrial habitats and may represent an important energetic link between the two, particularly in the tropics, where amphibian species richness and abundance are high. In the past 20 years, amphibian populations have declined dramatically around the world; numbers have decreased catastrophically in protected upland sites throughout the neotropics, usually resulting in the disappearance of over 75% of amphibians at a given site, particularly those species that breed in streams. Most studies of amphibian declines have focused on identifying causes and documenting changes in adult abundance, rather than on their ecological consequences. Here, we review evidence for the potential ecological effects of catastrophic amphibian declines, focusing on neotropical highland streams, where impacts will likely be greatest. Evidence to date suggests that amphibian declines will have large-scale and lasting ecosystem-level effects, including changes in algal com...

http://fwf.ag.utk.edu/mgray/wfs493/Whilesetal2006_FrontiersinEcology.pdf

Jose Checo Colón-Gaud

Papers

The effects of amphibian population declines on the structure and function of Neotropical stream ecosystems