J
Julien Maupetit
Researcher at Paris Diderot University
Publications - 18
Citations - 2690
Julien Maupetit is an academic researcher from Paris Diderot University. The author has contributed to research in topics: Web application & Personal computer. The author has an hindex of 11, co-authored 18 publications receiving 2342 citations. Previous affiliations of Julien Maupetit include Centre national de la recherche scientifique & University of Paris.
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Journal ArticleDOI
PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides
Pierre Thévenet,Yimin Shen,Julien Maupetit,Frédéric Guyon,Philippe Derreumaux,Pierre Tufféry +5 more
TL;DR: An updated version of PEP-FOLD is presented allowing the treatment of both linear and disulphide bonded cyclic peptides with 9–36 amino acids, and the server makes possible to define disULphide bonds and any residue–residue proximity under the guidance of the biologists.
Journal ArticleDOI
Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction.
Yimin Shen,Yimin Shen,Julien Maupetit,Julien Maupetit,Philippe Derreumaux,Philippe Derreumaux,Philippe Derreumaux,Pierre Tufféry,Pierre Tufféry +8 more
TL;DR: The results indicate that if the coarse-grained PEP-FOLD2 method is approaching maturity, the authors are not at the end of the game of mini-protein structure prediction, but this opens new perspectives for large-scale in silico experiments.
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PEP-FOLD: an online resource for de novo peptide structure prediction
TL;DR: PEP-FOLD, an online service, aimed at de novo modelling of 3D conformations for peptides between 9 and 25 amino acids in aqueous solution, finds that it locates lowest energy conformations differing by 2.6 Å Cα root mean square deviation from the full NMR structures.
Journal ArticleDOI
Mobyle: a new full web bioinformatics framework
Bertrand Néron,Hervé Ménager,Corinne Maufrais,Nicolas Joly,Julien Maupetit,Sébastien Letort,Sébastien Carrère,Pierre Tufféry,Catherine Letondal +8 more
TL;DR: The Mobyle system is designed to provide a flexible and usable Web environment for defining and running bioinformatics analyses that embeds simple yet powerful data management features that allow the user to reproduce analyses and to combine tools using a hierarchical typing system.
Journal ArticleDOI
fpocket: online tools for protein ensemble pocket detection and tracking.
TL;DR: Fpocket as discussed by the authors is a small-molecule pocket detection program, relying on the geometric alpha-sphere theory, which allows the identification of cavities for structure-based drug discovery or functional annotation of structures.