M
Marat Mustyakimov
Researcher at Los Alamos National Laboratory
Publications - 32
Citations - 5881
Marat Mustyakimov is an academic researcher from Los Alamos National Laboratory. The author has contributed to research in topics: Neutron diffraction & Neutron. The author has an hindex of 18, co-authored 32 publications receiving 4889 citations. Previous affiliations of Marat Mustyakimov include University of Tennessee & Oak Ridge National Laboratory.
Papers
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Journal ArticleDOI
Towards automated crystallographic structure refinement with phenix.refine
Pavel V. Afonine,Ralf W. Grosse-Kunstleve,Nathaniel Echols,Jeffrey J. Headd,Nigel W. Moriarty,Marat Mustyakimov,Thomas C. Terwilliger,Alexandre Urzhumtsev,Alexandre Urzhumtsev,Peter H. Zwart,Paul D. Adams,Paul D. Adams +11 more
TL;DR: This paper presents an overview of the major phenix.refine features, with extensive literature references for readers interested in more detailed discussions of the methods.
Journal ArticleDOI
Joint X-ray and neutron refinement with phenix.refine
Pavel V. Afonine,Marat Mustyakimov,Ralf W. Grosse-Kunstleve,Nigel W. Moriarty,Paul Langan,Paul D. Adams,Paul D. Adams +6 more
TL;DR: The implementation of crystallographic structure-refinement procedures that include both X-ray and neutron data (separate or jointly) in the PHENIX system is described.
Journal ArticleDOI
FEM: feature-enhanced map
Pavel V. Afonine,Nigel W. Moriarty,Marat Mustyakimov,Oleg V. Sobolev,Thomas C. Terwilliger,Dušan Turk,Alexandre Urzhumtsev,Alexandre Urzhumtsev,Paul D. Adams,Paul D. Adams +9 more
TL;DR: The non-iterative feature-enhancing approach improves crystallographic maps’ interpretability by reducing model bias and noise and strengthening the existing signal.
Journal ArticleDOI
Metal ion roles and the movement of hydrogen during reaction catalyzed by D-xylose isomerase: a joint x-ray and neutron diffraction study.
Andrey Kovalevsky,Leif Hanson,S. Zoë Fisher,Marat Mustyakimov,Sax A. Mason,V. Trevor Forsyth,Matthew P. Blakeley,David A. Keen,Trixie Wagner,H. L. Carrell,Amy K. Katz,Jenny P. Glusker,Paul Langan,Paul Langan +13 more
TL;DR: The structure of the metalloenzyme D-xylose isomerase is determined by neutron diffraction in order to locate H atoms (or their isotope D) and the results lead to new suggestions as to how changes might take place over the course of the reaction.
Journal ArticleDOI
Generalized X-ray and neutron crystallographic analysis: more accurate and complete structures for biological macromolecules
TL;DR: X-ray and neutron crystallographic data have been combined in a joint structure-refinement procedure that has been developed using recent advances in modern computational methodologies, including cross-validated maximum-likelihood target functions with gradient-based optimization and simulated annealing.