N
Naor Granik
Researcher at Technion – Israel Institute of Technology
Publications - 10
Citations - 165
Naor Granik is an academic researcher from Technion – Israel Institute of Technology. The author has contributed to research in topics: RNA & Fractional Brownian motion. The author has an hindex of 3, co-authored 9 publications receiving 94 citations.
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Journal ArticleDOI
Single-Particle Diffusion Characterization by Deep Learning
Naor Granik,Lucien E. Weiss,Elias Nehme,Maayan Levin,Michael Chein,Eran Perlson,Yael Roichman,Yoav Shechtman +7 more
TL;DR: A neural network is implemented to classify single-particle trajectories by diffusion type: Brownian motion, fractional BrownianMotion and continuous time random walk, and the applicability of the network architecture for estimating the Hurst exponent for fractionalBrownian motion and the diffusion coefficient for Brownianmotion on both simulated and experimental data is demonstrated.
Posted ContentDOI
Single particle diffusion characterization by deep learning
Naor Granik,Elias Nehme,Lucien E. Weiss,Maayan Levin,Michael Chein,Eran Perlson,Yael Roichman,Yoav Shechtman +7 more
TL;DR: A neural network is implemented to classify single particle trajectories according to diffusion type –Brownian motion, fractional Brownian motion (FBM) and Continuous Time Random Walk (CTRW), and the net is used to estimate the Hurst exponent for FBM, and the diffusion coefficient for BrownianMotion, demonstrating its applicability on simulated and experimental data.
Journal ArticleDOI
Overcoming the design, build, test bottleneck for synthesis of nonrepetitive protein-RNA cassettes.
Noa Katz,Eitamar Tripto,Naor Granik,Sarah Goldberg,Orna Atar,Zohar Yakhini,Zohar Yakhini,Yaron Orenstein,Roee Amit +8 more
TL;DR: In this paper, an oligo-library and machine learning-approach was applied to characterize the sequence and structural determinants of binding of the phage coat proteins of bacteriophages MS2 (MCP), PP7 (PCP), and Qβ (QCP) to RNA.
Journal ArticleDOI
Designing Bacterial Chemotactic Receptors Guided by Photonic Femtoliter Well Arrays for Quantifiable, Label-Free Measurement of Bacterial Chemotaxis.
Tzila Davidov,Naor Granik,Sharbel Zahran,Heidi Leonard,Inbal Adir,Ofek Elul,Tal Fried,Asif Gil,Bar Mayo,Shilo Ohayon,Shiran Sarig,Nofar Shasha,Shirane Tsedef,Shani Weiner,Michal Brunwasser-Meirom,Alexandra Ereskovsky,Noa Katz,Beate Kaufmann,Yuri Haimov,Ester Segal,Roee Amit +20 more
TL;DR: It is demonstrated that chemotaxis can be detected within minutes using intrinsic optical measurements of silicon femtoliter well arrays (FMAs) using phase-shift reflectometric interference spectroscopic measurements (PRISM) of the wells, enabling label-free, real-time quantification of the number of trapped bacteria cells in the optical readout.
Posted ContentDOI
Formation of synthetic RNP granules using engineered phage-coat-protein - RNA complexes
TL;DR: In this paper, the authors demonstrate that PP7-coat protein (PCP) and Qβ-coat protein (QCP) co-expressed with synthetic long non-coding RNA (slncRNA) encoded with multiple CP binding sites self-assemble into phase-separated synthetic RNP (SRNP) granules within E coli cells and in vitro SNRP granules exhibit hallmarks of RNP granule formation including phase separation from a semi-dilute liquid in vitro, and retention of structure after cell lysis.