Reactive oxygen species (ROS) and other radicals are involved in a variety of biological phenomena, such as mutation, carcinogenesis, degenerative and other diseases, inflammation, aging, and development. ROS are well recognized for playing a dual role as deleterious and beneficial species. The objectives of this review are to describe oxidative stress phenomena, terminology, definitions, and basic chemical characteristics of the species involved; examine the biological targets susceptible to oxidation and the defense mechanisms of the organism against these reactive metabolites; and analyze methodologies, including immunohistochemical markers, used in toxicological pathology in the visualization of oxidative stress phenomena. Direct detection of ROS and other free radicals is difficult, because these molecules are short-lived and highly reactive in a nonspecific manner. Ongoing oxidative damage is, thus, generally analyzed by measurement of secondary products including derivatives of amino acids, nuclei acids, and lipid peroxidation. Attention has been focused on electrochemical methods based on voltammetry measurements for evaluating the total reducing power of biological fluids and tissues. This approach can function as a tool to assess the antioxidant-reducing profile of a biological site and follow changes in pathological situations. This review thus includes different topics essential for understanding oxidative stress phenomena and provides tools for those intending to conduct study and research in this field.

https://journals.sagepub.com/doi/pdf/10.1080/01926230290166724

Oxidation of biological systems: oxidative stress phenomena, antioxidants, redox reactions, and methods for their quantification.

50 Years of Image Analysis

: The unpolarized absorption and circular dichroism spectra of the fundamental vibrational transitions of the chiral molecule, 4-methyl-2-oxetanone, are calculated ab initio. Harmonic force fields are obtained using Density Functional Theory (DFT), MP2, and SCF methodologies and a 5S4P2D/3S2P (TZ2P) basis set. DFT calculations use the Local Spin Density Approximation (LSDA), BLYP, and Becke3LYP (B3LYP) density functionals. Mid-IR spectra predicted using LSDA, BLYP, and B3LYP force fields are of significantly different quality, the B3LYP force field yielding spectra in clearly superior, and overall excellent, agreement with experiment. The MP2 force field yields spectra in slightly worse agreement with experiment than the B3LYP force field. The SCF force field yields spectra in poor agreement with experiment.The basis set dependence of B3LYP force fields is also explored: the 6-31G* and TZ2P basis sets give very similar results while the 3-21G basis set yields spectra in substantially worse agreements with experiment. jg

Ab initio calculation of vibrational absorption and circular dichroism spectra using density functional force fields

The valence and oxygen defect properties of cerium oxide nanoparticles (nanoceria) suggest that they may act as auto-regenerative free radical scavengers. Overproduction of the free radical nitric oxide (NO) by the enzyme inducible nitric oxide synthase (iNOS) has been implicated as a critical mediator of inflammation. NO is correlated with disease activity and contributes to tissue destruction. The ability of nanoceria to scavenge free radicals, or reactive oxygen species (ROS), and inhibit inflammatory mediator production in J774A.1 murine macrophages is investigated. Cells internalize nanoceria, the treatment is nontoxic, and oxidative stress and pro-inflammatory iNOS protein expression are abated with stimulation. In vivo studies show nanoceria deposition in mouse tissues with no pathogenicity. Taken together, it is suggested that cerium oxide nanoparticles are well tolerated in mice and are incorporated into cellular tissues. Furthermore, nanoceria may have the potential to reduce ROS production in states of inflammation and therefore serve as a novel therapy for chronic inflammation.

Anti‐inflammatory Properties of Cerium Oxide Nanoparticles

The last decade has been marked by tremendous progress in our understanding of the cell biology of mitochondria, with the identification of molecules and mechanisms that regulate their fusion, fission, motility, and the architectural transitions within the inner membrane. More importantly, the manipulation of these machineries in tissues has provided links between mitochondrial dynamics and physiology. Indeed, just as the proteins required for fusion and fission were identified, they were quickly linked to both rare and common human diseases. This highlighted the critical importance of this emerging field to medicine, with new hopes of finding drugable targets for numerous pathologies, from neurodegenerative diseases to inflammation and cancer. In the midst of these exciting new discoveries, an unexpected new aspect of mitochondrial cell biology has been uncovered; the generation of small vesicular carriers that transport mitochondrial proteins and lipids to other intracellular organelles. These mitochondrial-derived vesicles (MDVs) were first found to transport a mitochondrial outer membrane protein MAPL to a subpopulation of peroxisomes. However, other MDVs did not target peroxisomes and instead fused with the late endosome, or multivesicular body. The Parkinson's disease-associated proteins Vps35, Parkin, and PINK1 are involved in the biogenesis of a subset of these MDVs, linking this novel trafficking pathway to human disease. In this review, we outline what has been learned about the mechanisms and functional importance of MDV transport and speculate on the greater impact of these pathways in cellular physiology.

/pdf/a-new-pathway-for-mitochondrial-quality-control-1w6f6lalcn.pdf

A new pathway for mitochondrial quality control: mitochondrial‐derived vesicles

Purpose : To ascertain the possibility of fragmentation processes in lipid membranes when acted upon with γ-radiation under various conditions, and to evaluate fragmentation processes quantitatively in comparison with the lipid peroxidation processes. Materials and methods : Phospholipids as components of multilamellar liposomes exposed to 137 Cs γ-rays at dose-rates of 0.06 and 0.33 Gy s -1 in the dose range 0-18 kGy. Peroxidation products were determined spectrophotometrically and fragmentation products were analysed using thin-layer chromatography and GLC methods. Results : Phosphatidylglycerol containing unsaturated fatty acid residues and free hydroxyl groups underwent both peroxidation and fragmentation when its aqueous dispersions were treated with ionizing radiation. γ-Radiolysis of multilamellar liposomes led to the formation of peroxidation products, as well as phosphatidic acid and hydroxyacetone, fragmentation products of the initial lipid. Comparable radiation-chemical yields of conjugated-di...

Radiation-induced peroxidation and fragmentation of lipids in a model membrane

Formation of phosphatidic acid, ceramide, and diglyceride on radiolysis of lipids: identification by MALDI-TOF mass spectrometry.

Precursors for the selective generation of C-2 glyceryl radicals were synthesized, and the chemical behavior of the corresponding radicals was investigated by ESR spectroscopy, product analysis, and kinetic measurements. It was found that cleavage of the β-C,O bond proceeds rapidly, if a hydroxyl group is present at the radical carbon center. The rate constant for the elimination of a β-acetoxy group from radical 30 was dependent on the solvent (kE = 4 × 105 s-1 in methanol, kE = 2 × 107 s-1 in toluene). With these results and ab initio calculations a concerted elimination mechanism is suggested. α-Methoxy-substituted C-2 glyceryl radicals 42 and 43 showed heterolytic β-C,O bond cleavage under formation of radical cations. With ester-substituted radicals 24 and 35 no elimination could be observed. To demonstrate the biological significance of these findings, C-2 lysolecithin radical 53 was generated, which led to fast β-elimination.

Chemistry of C-2 Glyceryl Radicals: Indications for a New Mechanism of Lipid Damage

Effects of a number of quinones and diphenols of various structures on free-radical fragmentation processes taking place in &#102 -diols, glycerol, 2-aminoethanol, glycero-1-phosphate, ethylene glycol monobutyrate, maltose, and some lipids were investigated. Quinone additions have been found to change the direction of free-radical transformations of the compounds cited above by inhibiting formation of the respective fragmentation products owing to oxidation of radicals of the starting compounds. The results obtained and literature data available allow a suggestion to be made that the system quinone/diphenol is able to not only deactivate or generate such active species as O 2 &#148 &#109 but also control the realization probability of free-radical processes of peroxidation and fragmentation in biologically important molecules.

Quinones as Free-radical Fragmentation Inhibitors in Biologically Important Molecules

Carbohydrates/Radiolysis/O-glycoside bond/Cleavage. The formation of products resulting from the O-glycoside bond cleavage following radiolysis of aqueous solutions of methyl- α -D-glucopyranoside (I), 3-O-methyl- α -D-glucopyranose (II), maltose, lactose, gentiobiose and cellobiose were studied. Radiation-induced destruction yields were also determined for dextran, laminarin and trimethylcelulose upon irradiation of their aqueous solutions. Oxygen, quinones and compounds capable of forming quinoid structures were found to inhibit radiation-induced homolytic destruction processes taking place in glycosides, di- and polysaccharides. The data obtained in this study enabled the authors to demonstrate an important role played by the fragmentation reaction of C-2 radicals which were generated from the starting substances in the formation of final radiolysis products.

/pdf/homolytic-cleavage-of-the-o-glycoside-bond-in-carbohydrates-3jocol2czd.pdf

Oleg I. Shadyro

Papers

Radiation-induced peroxidation and fragmentation of lipids in a model membrane

Formation of phosphatidic acid, ceramide, and diglyceride on radiolysis of lipids: identification by MALDI-TOF mass spectrometry.

Chemistry of C-2 Glyceryl Radicals: Indications for a New Mechanism of Lipid Damage

Quinones as Free-radical Fragmentation Inhibitors in Biologically Important Molecules

Homolytic Cleavage of the O-glycoside Bond in Carbohydrates: A Steady-state Radiolysis Study