S
Shengjing Shi
Researcher at AgResearch
Publications - 24
Citations - 2647
Shengjing Shi is an academic researcher from AgResearch. The author has contributed to research in topics: Rhizosphere & Metagenomics. The author has an hindex of 11, co-authored 20 publications receiving 1607 citations. Previous affiliations of Shengjing Shi include Lincoln University (New Zealand) & University of California, Berkeley.
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Journal ArticleDOI
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly.
Kateryna Zhalnina,Katherine B. Louie,Zhao Hao,Nasim Mansoori,Ulisses Nunes da Rocha,Ulisses Nunes da Rocha,Shengjing Shi,Heejung Cho,Heejung Cho,Ulas Karaoz,Dominique Loqué,Benjamin P. Bowen,Mary K. Firestone,Mary K. Firestone,Trent R. Northen,Eoin L. Brodie,Eoin L. Brodie +16 more
TL;DR: It is shown that pre-programmed developmental processes in plants result in consistent patterns in the chemical composition of root exudates, which provides a mechanistic underpinning for the process of rhizosphere microbial community assembly and provides an attractive direction for the manipulation of the Rhizosphere microbiome for beneficial outcomes.
Journal ArticleDOI
The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages
Shengjing Shi,Shengjing Shi,Erin E. Nuccio,Erin E. Nuccio,Zhou J. Shi,Zhili He,Jizhong Zhou,Jizhong Zhou,Jizhong Zhou,Mary K. Firestone,Mary K. Firestone +10 more
TL;DR: Rhizosphere networks were substantially more complex than those in surrounding soils, indicating the rhizosphere has a greater potential for interactions and niche-sharing and quorum-based signalling as one potential strategy.
Journal ArticleDOI
Effects of selected root exudate components on soil bacterial communities.
Shengjing Shi,Shengjing Shi,Alan Richardson,Maureen O'Callaghan,Kristen M. DeAngelis,E. Eirian Jones,Alison Stewart,Mary K. Firestone,Mary K. Firestone,Leo M. Condron +9 more
TL;DR: It is indicated that OAs play a significant role in shaping soil bacterial communities and this may therefore have a significant impact on plant growth.
Journal ArticleDOI
Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive Seasons
Shengjing Shi,Shengjing Shi,Erin E. Nuccio,Erin E. Nuccio,Donald J. Herman,Donald J. Herman,Ruud Rijkers,Katerina Y. Estera,Jiabao Li,Ulisses Nunes da Rocha,Zhili He,Jennifer Pett-Ridge,Eoin L. Brodie,Eoin L. Brodie,Jizhong Zhou,Jizhong Zhou,Jizhong Zhou,Mary K. Firestone,Mary K. Firestone +18 more
TL;DR: The response of soil bacteria to roots of the common annual grass Avena fatua over two growing seasons is analyzed using high-throughput sequencing of 16S rRNA genes to suggest adaptation of the indigenous bacterial community to this common grass over the many decades of its presence.
Journal ArticleDOI
Stable isotope informed genome-resolved metagenomics reveals that Saccharibacteria utilize microbially-processed plant-derived carbon.
Evan P. Starr,Shengjing Shi,Steven J. Blazewicz,Alexander J. Probst,Donald J. Herman,Donald J. Herman,Mary K. Firestone,Mary K. Firestone,Jillian F. Banfield,Jillian F. Banfield +9 more
TL;DR: It is proposed that isotopically labeled CO2 is incorporated into plant-derived carbon and then into the DNA of rhizosphere organisms capable of nucleotide synthesis, and the nucleotides are recycled into Saccharibacterial genomes.