Shuqi Zhao

TL;DR: A support vector machine-based classifier, named Coding Potential Calculator (CPC), to assess the protein-coding potential of a transcript based on six biologically meaningful sequence features, which can discriminate coding from noncoding transcripts with high accuracy.

TL;DR: These results provide a comparative analysis of changes in the small RNA profiles and in the genes of RNA silencing machinery induced by different viruses in a natural and economically important crop host plant, and uncover new mechanisms and complexity of virus-host interactions.

TL;DR: A support vector machines (SVMs) classifier was built employing a carefully selected set of new and previously published attributes that provided insights into the mechanisms of the disease association of SAPs.

TL;DR: SynDB is the most comprehensive database to date for synaptic proteins, a hierarchical representation that includes 177 terms with hundreds of synonyms and branches up to eight levels deep and associated 125 additional protein keywords and 109 InterPro domains with these SynO terms.

TL;DR: A data-centric knowledge-sharing platform for biologists to fetch, analyze, manipulate and share data under an intuitive web interface, which allows users to share input data, analysis results, scientific literatures and customized workflows to specified users or groups with sophisticated privilege settings.