scispace - formally typeset
W

W. C. Johnson

Researcher at Oregon State University

Publications -  5
Citations -  1413

W. C. Johnson is an academic researcher from Oregon State University. The author has contributed to research in topics: Circular dichroism & Protein secondary structure. The author has an hindex of 5, co-authored 5 publications receiving 1372 citations.

Papers
More filters
Journal ArticleDOI

Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra.

TL;DR: Although the variable selection method improves the analysis of circular dichroism data truncated at 190 nm, data measured to 178 nm gives superior results, it is shown that improving the fit to the measured CD beyond the accuracy of the data can result in poorer analyses.
Journal ArticleDOI

Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication.

TL;DR: This paper shows how this method is based on the construction of the generalized inverse from the singular value decomposition of a set of CD spectra corresponding to proteins whose secondary structures are known from X-ray crystallography without resorting to least-squares fitting and standard matrix inversion techniques.
Journal ArticleDOI

Experimental errors and their effect on analyzing circular dichroism spectra of proteins.

TL;DR: Seven types of error that may interfere with the analysis of protein circular dichroism (CD) spectra for secondary structure are examined and it is found that small errors in the baseline will rationalize poor analyses.
Journal ArticleDOI

Correcting the circular dichroism spectra of peptides for contributions of absorbing side chains.

TL;DR: A method to correct the CD spectra of peptides undergoing the helix-coil transition for contributions due to absorbing side chains using singular value decomposition and the resulting coefficients from the fitting are used along with the common basis vectors to regenerate the entire corrected spectrum.
Journal ArticleDOI

Effects of relative band intensity on prediction of protein secondary structure from CD

TL;DR: The results demonstrate that a two-point calibration of a CD instrument is mandatory to avoid serious errors when estimating secondary structure from protein CD spectra.