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Yael Kalma

Researcher at Weizmann Institute of Science

Publications -  28
Citations -  1709

Yael Kalma is an academic researcher from Weizmann Institute of Science. The author has contributed to research in topics: Medicine & Embryo. The author has an hindex of 10, co-authored 18 publications receiving 1510 citations. Previous affiliations of Yael Kalma include San Antonio River Authority & Tel Aviv University.

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Journal ArticleDOI

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters

TL;DR: A method for obtaining parallel, highly accurate gene expression measurements from thousands of designed promoters is devised and applied to measure the effect of systematic changes in the location, number, orientation, affinity and organization of transcription-factor binding sites and nucleosome-disfavoring sequences.
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E2Fs up-regulate expression of genes involved in DNA replication, DNA repair and mitosis.

TL;DR: The E2F family of transcription factors plays a pivotal role in the regulation of cell proliferation in higher eukaryotes and up-regulates the expression of genes not previously described as E1F target genes, which suggest that E 2F affects cell cycle progression both at S phase and during mitosis.
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Unraveling determinants of transcription factor binding outside the core binding site

TL;DR: A novel experimental assay termed BunDLE-seq that provides quantitative measurements of TF binding to thousands of fully designed sequences of 200 bp in length within a single experiment and shows that TF-specific models based on the sequence or DNA shape of the regions flanking the core binding site are highly predictive of the measured differential TF binding.
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Endometrial biopsy-induced gene modulation: first evidence for the expression of bladder-transmembranal uroplakin Ib in human endometrium.

TL;DR: The biopsy-induced increase in the expression of UPIb and other genes encoding membrane proteins supports the possible importance of the membrane structure and stability during implantation.