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Yannick Djoumbou
Researcher at National Institute for Nanotechnology
Publications - 9
Citations - 7274
Yannick Djoumbou is an academic researcher from National Institute for Nanotechnology. The author has contributed to research in topics: Human Metabolome Database & Metabolome. The author has an hindex of 9, co-authored 9 publications receiving 6540 citations. Previous affiliations of Yannick Djoumbou include University of Alberta & International Agency for Research on Cancer.
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Journal ArticleDOI
HMDB 3.0—The Human Metabolome Database in 2013
David S. Wishart,Timothy Jewison,An Chi Guo,Michael Wilson,Craig Knox,Yifeng Liu,Yannick Djoumbou,Rupasri Mandal,Farid Aziat,Edison Dong,Souhaila Bouatra,Igor Sinelnikov,David Arndt,Jianguo Xia,Philip Liu,Faizath S. Yallou,Trent C. Bjorndahl,Rolando Perez-Pineiro,Roman Eisner,Felicity Allen,Vanessa Neveu,Russell Greiner,Augustin Scalbert +22 more
TL;DR: New database visualization tools and new data content have been added or enhanced to the HMDB, which includes better spectral viewing tools, more powerful chemical substructure searches, an improved chemical taxonomy and better, more interactive pathway maps.
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DrugBank 4.0: shedding new light on drug metabolism
Vivian Law,Craig Knox,Yannick Djoumbou,Timothy Jewison,An Chi Guo,Yifeng Liu,Adam Maciejewski,David Arndt,Michael Wilson,Vanessa Neveu,Alexandra Tang,Geraldine Gabriel,Carol Ly,Sakina Adamjee,Zerihun T. Dame,Beomsoo Han,You Zhou,David S. Wishart +17 more
TL;DR: The latest update of DrugBank, DrugBank 4.0, has been further expanded to contain data on drug metabolism, absorption, distribution, metabolism, excretion and toxicity (ADMET) and other kinds of quantitative structure activity relationships (QSAR) information.
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DrugBank 3.0: a comprehensive resource for ‘Omics’ research on drugs
Craig Knox,Vivian Law,Timothy Jewison,Philip Liu,Son Ly,Alex Frolkis,Allison Pon,Kelly Banco,Christine Mak,Vanessa Neveu,Yannick Djoumbou,Roman Eisner,An Chi Guo,David S. Wishart +13 more
TL;DR: DrugBank 3.0 represents the result of 2 years of manual annotation work aimed at making the database much more useful for a wide range of ‘omics’ applications, particularly with regard to drug target, drug description and drug action data.
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SMPDB 2.0: big improvements to the Small Molecule Pathway Database.
Timothy Jewison,Yilu Su,Fatemeh Miri Disfany,Yongjie Liang,Craig Knox,Adam Maciejewski,Jenna Poelzer,Jessica Huynh,You Zhou,David Arndt,Yannick Djoumbou,Yifeng Liu,Lu Deng,An Chi Guo,Beomsoo Han,Allison Pon,Michael Wilson,Shahrzad Rafatnia,Philip Liu,David S. Wishart +19 more
TL;DR: Significant improvements to SMPDB’s visualization interface now make the browsing, selection, recoloring and zooming of pathways far easier and far more intuitive.
Journal ArticleDOI
T3DB: the toxic exposome database
David S. Wishart,David Arndt,Allison Pon,Tanvir Sajed,An Chi Guo,Yannick Djoumbou,Craig Knox,Michael Wilson,Yongjie Liang,Jason R. Grant,Yifeng Liu,Seyed Ali Goldansaz,Stephen M. Rappaport +12 more
TL;DR: The latest release of the T3DB has been substantially upgraded to include many more compounds, targets and gene expression datasets, and now includes extensive data on ‘normal’ toxic compound concentrations in human biofluids as well as detailed chemical taxonomies, informative chemical ontologies and a large number of referential NMR, MS/MS and GC-MS spectra.