What is the geometric representation of DNA?
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The geometric representation of DNA involves transforming DNA sequences into numerical vectors and arranging them into a zigzag curve . Another approach involves transforming DNA sequences into vectors in 5-dimensional space, where nucleotides of the same type are on the same line . A novel 4D graphical representation method of DNA sequences has also been proposed, which avoids non-unique representations and overlapping lines . Additionally, a method based on chaos geometry in 4-dimensional space has been developed for graphical representation of DNA sequences . A new method for finding local similar subsequences among whole genomes is based on random walk visualization and reduces the search problem to finding parts of a geometric object within a small-scale space .
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| Papers (4) | Insight |
|---|---|
| The geometric representation of DNA in the paper is the Chaos 4-dimensional Representation (C4DR) in 4-dimensional space. | |
7 Citations | The paper describes a novel 4D graphical representation method of DNA sequences, which involves using a set of N-point coordinates to represent an arbitrary DNA sequence. The geometric center of the DNA sequences is calculated using a formula. |
| The geometric representation of DNA in this paper is a collection of vectors in a 5-dimensional space, where nucleotides of the same type are on the same line. | |
4 Citations | The paper introduces a graphical representation of DNA sequences that arranges each nucleotide into a numerical vector and concatenates them into a zigzag curve. |
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