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Andrew J. Patterson
Researcher at University of Dundee
Publications - 3
Citations - 1291
Andrew J. Patterson is an academic researcher from University of Dundee. The author has contributed to research in topics: File format & Data conversion. The author has an hindex of 3, co-authored 3 publications receiving 966 citations.
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Journal ArticleDOI
Metadata matters: access to image data in the real world
Melissa Linkert,Curtis Rueden,Chris Allan,Jean-Marie Burel,William J. Moore,Andrew J. Patterson,Brian Loranger,Josh Moore,Carlos H. Neves,Donald MacDonald,Aleksandra Tarkowska,J Caitlin Sticco,Emma Hill,Mike Rossner,Kevin W. Eliceiri,Jason R. Swedlow +15 more
TL;DR: An open standard format for multidimensional microscopy image data is described and it is called on the community to use open image data standards and to insist that all imaging platforms support these file formats.
Journal ArticleDOI
OMERO: flexible, model-driven data management for experimental biology
Chris Allan,Jean-Marie Burel,Josh Moore,Colin Blackburn,Melissa Linkert,Scott Loynton,Donald MacDonald,William J. Moore,Carlos H. Neves,Andrew J. Patterson,Michael Porter,Aleksandra Tarkowska,Brian Loranger,Jerome Avondo,Ingvar Lagerstedt,Luca Lianas,Simone Leo,Katherine Hands,Ronald T. Hay,Ardan Patwardhan,Christoph Best,Christoph Best,Gerard J. Kleywegt,Gianluigi Zanetti,Jason R. Swedlow +24 more
TL;DR: OMERO is a software platform that enables access to and use of a wide range of biological data, and its design and flexibility have enabled its use for light- microscopy, high-content-screening, electron-microscopy and even non-image-genotype data.
Proceedings ArticleDOI
OMERO and Bio-Formats 5: flexible access to large bioimaging datasets at scale
Josh Moore,Melissa Linkert,Colin Blackburn,Mark Carroll,Richard K. Ferguson,Helen Flynn,Kenneth Gillen,Roger Leigh,Simon Li,Dominik Lindner,William J. Moore,Andrew J. Patterson,Blazej Pindelski,B. Ramalingam,E. Rozbicki,Aleksandra Tarkowska,Petr Walczysko,Chris Allan,Jean-Marie Burel,Jason R. Swedlow +19 more
TL;DR: New versions of Bio-Formats and OMERO are described that are specifically designed to support large, multi-gigabyte or terabyte scale datasets that are routinely collected across most domains of biological and biomedical research.