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Anthony Berno
Researcher at Affymetrix
Publications - 33
Citations - 7265
Anthony Berno is an academic researcher from Affymetrix. The author has contributed to research in topics: Gene & Single-nucleotide polymorphism. The author has an hindex of 17, co-authored 33 publications receiving 7193 citations. Previous affiliations of Anthony Berno include Massachusetts Institute of Technology.
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Journal ArticleDOI
Large-Scale Identification, Mapping, and Genotyping of Single-Nucleotide Polymorphisms in the Human Genome
David G. Wang,Jian-Bing Fan,Jian-Bing Fan,Chia-Jen Siao,Chia-Jen Siao,Anthony Berno,Anthony Berno,Peter M. Young,Peter M. Young,Ron Sapolsky,Ron Sapolsky,Ghassan Ghandour,Ghassan Ghandour,Nancy Perkins,Nancy Perkins,Ellen Winchester,Ellen Winchester,Jessica B. Spencer,Jessica B. Spencer,Leonid Kruglyak,Leonid Kruglyak,Lincoln Stein,Lincoln Stein,Linda Hsie,Linda Hsie,Thodoros Topaloglou,Thodoros Topaloglou,Earl Hubbell,Earl Hubbell,Elizabeth M. Robinson,Elizabeth M. Robinson,Michael P. Mittmann,Michael P. Mittmann,Macdonald S. Morris,Macdonald S. Morris,Naiping Shen,Naiping Shen,Dan Kilburn,Dan Kilburn,John D. Rioux,John D. Rioux,Chad Nusbaum,Chad Nusbaum,Steve Rozen,Steve Rozen,Thomas J. Hudson,Thomas J. Hudson,Robert J. Lipshutz,Robert J. Lipshutz,Mark S. Chee,Mark S. Chee,Eric S. Lander,Eric S. Lander +52 more
TL;DR: A large-scale survey for SNPs was examined by a combination of gel-based sequencing and high-density variation-detection DNA chips, and a genetic map was constructed showing the location of 2227 candidate SNPs.
Journal ArticleDOI
Accessing Genetic Information with High-Density DNA Arrays
Mark S. Chee,Robert Yang,Earl Hubbell,Anthony Berno,Xiaohua C. Huang,David Stern,Jim Winkler,David J. Lockhart,Macdonald S. Morris,Stephen P. A. Fodor +9 more
TL;DR: The simultaneous analysis of the entire human mitochondrial genome is described here and can be used to address a variety of questions in molecular genetics including gene expression, genetic linkage, and genetic variability.
Journal ArticleDOI
Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21
Nila Patil,Anthony Berno,David A. Hinds,Wade A. Barrett,Jigna Doshi,Coleen R. Hacker,Curtis Kautzer,Danny H. Lee,Claire Marjoribanks,David P. McDonough,Bich T. N. Nguyen,Michael Norris,John B. Sheehan,Naiping Shen,David L. Stern,Renee Stokowski,Daryl J. Thomas,Mark Trulson,Kanan R. Vyas,Kelly A. Frazer,Stephen P. A. Fodor,David R. Cox +21 more
TL;DR: High-density oligonucleotide arrays are used in combination with somatic cell genetics to identify a large fraction of all common human chromosome 21 SNPs and to directly observe the haplotype structure defined by these SNPs.
Journal ArticleDOI
Parallel Genotyping of Human SNPs Using Generic High-density Oligonucleotide Tag Arrays
Jian-Bing Fan,Xiaoqiong Chen,Marc K. Halushka,Anthony Berno,Xiaohua Huang,Thomas B. Ryder,Robert J. Lipshutz,David J. Lockhart,Aravinda Chakravarti +8 more
TL;DR: A highly parallel method for genotyping single nucleotide polymorphisms (SNPs) using generic high-density oligonucleotide arrays that contain thousands of preselected 20-mer oligon nucleotide tags, which can be used for allele-frequency estimation in pooled DNA samples.
Journal ArticleDOI
Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic mycobacterium dna arrays
Thomas R. Gingeras,Ghassan Ghandour,Eugene Wang,Anthony Berno,Peter M. Small,Francis Drobniewski,David Alland,Edward Desmond,Mark Holodniy,Jorg Drenkow +9 more
TL;DR: This work demonstrates the general point that DNA microarrays that sequence important genomic regions (such as drug resistance or pathogenicity islands) can simultaneously identify species and provide some insight into the organism's population structure.