Dissimilatory Fe(III) and Mn(IV) reduction.

Organic acids, such as malate, citrate and oxalate, have been proposed to be involved in many processes operating in the rhizosphere, including nutrient acquisition and metal detoxification, alleviation of anaerobic stress in roots, mineral weathering and pathogen attraction. A full assessment of their role in these processes, however, cannot be determined unless the exact mechanisms of plant organic acid release and the fate of these compounds in the soil are more fully understood. This review therefore includes information on organic acid levels in plants (concentrations, compartmentalisation, spatial aspects, synthesis), plant efflux (passive versus active transport, theoretical versus experimental considerations), soil reactions (soil solution concentrations, sorption) and microbial considerations (mineralization). In summary, the release of organic acids from roots can operate by multiple mechanisms in response to a number of well-defined environmental stresses (e.g., Al, P and Fe stress, anoxia): These responses, however, are highly stress- and plant-species specific. In addition, this review indicates that the sorption of organic acids to the mineral phase and mineralisation by the soil's microbial biomass are critical to determining the effectiveness of organic acids in most rhizosphere processes.

Organic acids in the rhizosphere: a critical review

That major flows of energy occur along detrital pathways in all ecosystems is a recent recognition. In freshwater ecosystems, detritus or dead organic matter (217) has two possible sources: autochthonous detritus generated within the ecosystem and allochthonous detritus generated externally. This review is concerned with the breakdown of vascular plant detritus whether autochthonous, from aquatic vascular plants, or allochthonous, derived from riparian trees and herbs. The importance to the energetics of streams of vascular plant material from riparian vegetation was recognized in early studies by Nelson & Scott (184), Egglishaw (85), and Minshall (175). Organic matter budgets for various streams have provided quantitative data to support these early observations (96, 132, 182, 254). However, many low-order streams that lack canopies of riparian vegetation may be dominated by autochthonous primary production of nonvascular plant origin. (72, 176). Theoretical models (256) predict increasing importance of autochthonous production by periphyton and aquatic vascular plants for middle-order streams but less importance of these sources in very large streams, mainly due to light limitation. The relative dominance of allochthonous vs autochthonous sources has been shown to vary between stream systems and with local conditions within streams (72, 178). While vascular plant leaves have received most attention in stream research, there is growing recognition that wood is also important. The direct contribution of wood to stream energy budgets is minimal because wood is resistant to breakdown (e.g. 8, 251). However, woody debris is indirectly important because it creates habitat for aquatic organisms (5), promotes

Vascular plant breakdown in freshwater ecosystems

Nitrate attenuation in groundwater: a review of biogeochemical controlling processes.

Chromium is a highly toxic non-essential metal for microorganisms and plants. Due to its widespread industrial use, chromium (Cr) has become a serious pollutant in diverse environmental settings. The hexavalent form of the metal, Cr(VI), is considered a more toxic species than the relatively innocuous and less mobile Cr(III) form. The presence of Cr in the environment has selected microbial and plant variants able to tolerate high levels of Cr compounds. The diverse Cr-resistance mechanisms displayed by microorganisms, and probably by plants, include biosorption, diminished accumulation, precipitation, reduction of Cr(VI) to Cr(III), and chromate efflux. Some of these systems have been proposed as potential biotechnological tools for the bioremediation of Cr pollution. In this review we summarize the interactions of bacteria, algae, fungi and plants with Cr and its compounds.

http://envismadrasuniv.org/Bioremediation/pdf/Interactions%20of%20chromium%20with%20microorganisms.pdf

Interactions of chromium with microorganisms and plants

THE presence of synthetic and naturally occurring chelating agents in nuclear and toxic-metal wastes is a major concern because of their potential to enhance mobilization of metal ions away from the disposal sites1–3. Of particular interest is citric acid, which is present in low-level and transuranic radioactive wastes4,5 and in domestic and industrial wastes (as washing fluids, for instance), as well as being found naturally. Citrate ions form multidentate, stable complexes with a variety of toxic metals and radionuclides; but biodegradation of these complexes, precipitating the metal ions as insoluble hydroxides, oxides or other salts, may retard migration. Here we report a study of the biodegradation of citrate complexes of Ca, Fe(n), Fe(m), Cd, Cu, Ni, Pb and U. Several of these complexes were not readily degraded by bacteria, and the biodegradability depended on the chemical nature of the complex, not on the toxicity of the metal to the bacteria. This resistance to biodegradation implies that citrate complexation may play an important part in migration of these hazardous wastes.

Biodegradation of metal citrate complexes and implications for toxic-metal mobility

https://mmbr.asm.org/content/mmbr/51/1/43.full.pdf

Microbial metabolism of homocyclic and heterocyclic aromatic compounds under anaerobic conditions.

Speciation of uranium in cultures of Clostridium sp. by X-ray absorption near-edge spectroscopy (XANES) at the National Synchrotron Light Source and by X-ray photoelectron spectroscopy (XPS) showed that U(VI) was reduced to U(IV). In addition to U(IV), a lower oxidation state of uranium, most probably U(III), was detected by XANES in the bacterial cultures. Reduction of uranium occurred only in the presence of growing or resting cells. Organic acid metabolites, the extracellular components of the culture medium, and heat-killed cells failed to reduce uranium under anaerobic conditions. The addition of uranyl acetate or uranyl nitrate (>210[mu]M U) to the culture medium retarded the growth of the bacteria as evidenced by an increase in the lag period before resumption of growth, by decreases in turbidity, and in the total production of gas and organic acid metabolites. These results show that uranium in wastes can be stabilized by the action of anaerobic bacteria. 31 refs., 2 figs., 3 tabs.

XPS and XANES Studies of Uranium Reduction by Clostridium sp.

Decontamination of metal surfaces contaminated with low levels of radionuclides is a major concern at Department of Energy facilities. The development of an environmentally friendly and cost-effective decontamination process requires an understanding of their association with the corroding surfaces. We investigated the association of uranium with the amorphous and crystalline forms of iron oxides commonly formed on corroding steel surfaces. Uranium was incorporated with the oxide by addition during the formation of ferrihydrite, goethite, green rust II, lepidocrocite, maghemite, and magnetite. X-ray diffraction confirmed the mineralogical form of the oxide. EXAFS analysis at the U L(III) edge showed that uranium was present in hexavalent form as a uranyl oxyhydroxide species with goethite, maghemite, and magnetite and as a bidentate inner-sphere complex with ferrihydrite and lepidocrocite. Iron was present in the ferric form with ferrihydrite, goethite, lepidocrocite, and maghemite; whereas with magnetite and green rust II, both ferrous and ferric forms were present with characteristic ferrous:total iron ratios of 0.65 and 0.73, respectively. In the presence of the uranyl ion, green rust II was converted to magnetite with concomitantreduction of uranium to its tetravalent form. The rate and extent of uranium dissolution in dilute HCl depended on its association with the oxide: uranium present as oxyhydroxide species underwent rapid dissolution followed by a slow dissolution of iron; whereas uranium present as an inner-sphere complex with iron resulted in concomitant dissolution of the uranium and iron.

Association of uranium with iron oxides typically formed on corroding steel surfaces

https://www.wipp.energy.gov/library/cra/2009_cra/references/Others/Francis_1998_Biotransformation_of_U_and_other_An_in_Radioactive_Wastes.pdf

Arokiasamy J. Francis

Papers

Biodegradation of metal citrate complexes and implications for toxic-metal mobility

Microbial metabolism of homocyclic and heterocyclic aromatic compounds under anaerobic conditions.

XPS and XANES Studies of Uranium Reduction by Clostridium sp.

Association of uranium with iron oxides typically formed on corroding steel surfaces

Biotransformation of uranium and other actinides in radioactive wastes