We review the effects of fishing on benthic fauna, habitat, diversity, community structure and trophic interactions in tropical, temperate and polar marine environments and consider whether it is possible to predict or manage fishing-induced changes in marine ecosystems Such considerations are timely given the disillusionment with some fishery management strategies and that policy makers need a scientific basis for deciding whether they should respond to social, economic and political demands for instituting or preventing ecosystem-based management Fishing has significant direct and indirect effects on habitat, and on the diversity, structure and productivity of benthic communities These effects are most readily identified and last longest in those areas that experience infrequent natural disturbance The initiation of fishing in an unfished system leads to dramatic changes in fish community structure As fishing intensity increases the additional effects are more difficult to detect Fishing has accelerated and magnified natural declines in the abundance of many forage fishes and this has lead to reduced reproductive success and abundance in birds and marine mammals However, such donor-controlled dynamics are less apparent in food webs where fishes are the top predators since their feeding strategies are rather more plastic than those of most birds and mammals Fishers tend to target species in sequence as a fishery develops and this leads to changes in the composition of the fished communities with time The dramatic and apparently compensatory shifts in the biomass of different species in many fished ecosystems have often been driven by environmental change rather than the indirect effects of fishing Indeed, in most pelagic systems, species replacements would have occurred, albeit less rapidly, in the absence of fishing pressure In those cases when predator or prey species fill a key role, fishing can have dramatic indirect effects on community structure Thus fishing has shifted some coral reef ecosystems to alternate stable states because there is tight predator–prey coupling between invertebrate feeding fishes and sea urchins Fishing has reduced, and locally extirpated, populations of predatory fishes These reductions do not have a consistent effect on the abundance and diversity of their prey: environmental processes control prey populations in some systems, whereas top-down processes are more important in others By-catch which is discarded during fishing activities may sustain populations of scavenging species, particularly seabirds We conclude by identifying the circumstances in which new research is needed to guide managers and stress the importance of unfished control sites for studies of fishing effects We discuss the advantages and disadvantages of closed area management (marine reserves) and the conditions under which such management is likely to provide benefits for the fishery or ecosystem

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The effects of fishing on marine ecosystems

An analytical theory is presented to describe the combined motion of waves and currents in the vicinity of a rough bottom and the associated boundary shear stress. Characteristic shear velocities are defined for the respective wave and current boundary layer regions by using a combined wave-current friction factor, and turbulent closure is accomplished by employing a time invariant turbulent eddy viscosity model which increases linearly with height above the seabed. The resulting linearized governing equations are solved for the wave and current kinematics both inside and outside the wave boundary layer region. For the current velocity profile above the wave boundary layer, the concept of an apparent bottom roughness is introduced, which depends on the physical bottom roughness as well as the wave characteristics. The net result is that the current above the wave boundary layer feels a larger resistance due to the presence of the wave. The wave-current friction factor and the apparent roughness are found as a function of the velocity of the current relative to the wave orbital velocity, the relative bottom roughness, and the angle between the currents and the waves. In the limiting case of a pure wave motion the predictions of the velocity profile and wave friction factor from the theory have been shown to give good agreement with experimental results. The reasonable nature of the concept of the apparent bottom roughness is demonstrated by comparison with field observations of very large bottom roughnesses by previous investigators. The implications of the behavior predicted by the model on sediment transport and shelf circulation models are discussed.

Combined wave and current interaction with a rough bottom

Five large rivers that discharge on the western North Atlantic continental shelf carry about 45% of the nitrogen (N) and 70% of the phosphorus (P) that others estimate to be the total flux of these elements from the entire North Atlantic watershed, including North, Central and South America, Europe, and Northwest Africa. We estimate that 61 · 109 moles y-1 of N and 20 · 109 moles y-1 of P from the large rivers are buried with sediments in their deltas, and that an equal amount of N and P from the large rivers is lost to the shelf through burial of river sediments that are deposited directly on the continental slope. The effective transport of active N and P from land to the shelf through the very large rivers is thus reduced to 292 · 109 moles y-1 of N and 13 · 109 moles y-1 of P.

The fate of nitrogen and phosphorus at the land-sea margin of the North Atlantic Ocean

http://joezambon.com/prof/pubs/2010_warner.pdf

Development of a Coupled Ocean-Atmosphere-Wave-Sediment Transport (COAWST) Modeling System

The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life – SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO2 and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO2 and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short discussion on protection and management methods.

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Man and the last great wilderness: human impact on the deep sea.

Temperature data spanning the entire Middle Atlantic Bight (MAB) during 1979 are used to study the structure and evolution of the cold pool. The Nantucket Shoals and New England Shelf appear to be the source of the coldest water found in the MAB in late winter. During the spring and summer, water within the cold pool in the New York Bight north of Hudson Canyon remains colder than any shelf water either to the northeast or southwest. Thus the coldest cold-pool water persists there as a remnant of winter-cooled water rather than being replenished by a colder upstream source, and south of Hudson Canyon, cold-pool temperatures decrease in June and July as colder water from upstream is advected southwestward along the coast. Both temperature data and direct current measurements suggest that the mean alongshore current has a minimum between Nantucket Shoals and Hudson Canyon. The alongshore variation of shelf topography appears to be responsible for the spatial variation in both the alongshelf drift s...

The Middle Atlantic Bight Cold Pool: Evolution of the Temperature Structure During Summer 1979

Long-term in situ observations made at three locations on the mid-Atlantic continental shelf during 1975--1976 clearly show intermitten movement of bottom sediment caused by currents, waves, and other forcing mechanisms. In winter, storm-associated bottom currents greater than 30 cms/sup -1/ resuspended and transported sediments. Net water particle excursions during storms were about 20--30 km longshelf and 5--10 km cross-shelf. Wave-induced bottom currents also resuspended sediments during periods of low mean flow. Sediment motion was observed in summer, although bottom conditions were generally tranquil. Significant changes in suspended matter concentration were observed that were only partially related to bottom currents. These changes may have been caused by biological activity or advection. Bottom currents on the mid-Atlantic region of the continental shelf were characterized by a coherent, primarily cross-shelf tidal flow of 5--10 cm s/sup -1/ and a low-frequency longshelf component of 5--20 cm s/sup -1/. The longshelf current was coherent over length scales of 100 km at tidal frequencies and for motions with periods greater than 50 hours. For these longer periods the longshelf flow was coherent with wind stress, which implies that winds were a mojor driving force of the longshelf current. The cross-shelf current was not coherent at stationsmore » separated by 100 km except at tidal frequencies. Packets of high-frequency internal waves were observed during stratified conditions in summer with bottom currents as large as 20 cm s/sup -1/.« less

Long-term observations of bottom current and bottom sediment movement on the mid-Atlantic continental shelf

Tidal dispersion and the horizontal exchange of water between Boston Harbor and the surrounding ocean are examined with a high-resolution (200 m) depth-averaged numerical model. The strongly varying bathymetry and coastline geometry of the harbor generate complex spatial patterns in the modeled tidal currents which are verified by shipboard acoustic Doppler surveys. Lagrangian exchange experiments demonstrate that tidal currents rapidly exchange and mix material near the inlets of the harbor due to asymmetry in the ebb/flood response. This tidal mixing zone extends roughly a tidal excursion from the inlets and plays an important role in the overall flushing of the harbor. Because the tides can only efficiently mix material in this limited region, however, harbor flushing must be considered a two step process: rapid exchange in the tidal mixing zone, followed by flushing of the tidal mixing zone by nontidal residual currents. Estimates of embayment flushing based on tidal calculations alone therefore can significantly overestimate the flushing time that would be expected under typical environmental conditions. Particle-release simulations from point sources also demonstrate that while the tides efficiently exchange material in the vicinity of the inlets, the exact nature of dispersion from point sources is extremely sensitive to the timing and location of the release, and the distribution of particles is streaky and patchlike. This suggests that high-resolution modeling of dispersion from point sources in these regions must be performed explicitly and cannot be parameterized as a plume with Gaussian-spreading in a larger scale flow field.

Modeling tidal exchange and dispersion in Boston Harbor

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Atlas of tidal elevation and current observations on the Northeast American continental shelf and slope

Measurements of currents and light transmission were made at bottom tripods and moorings arrayed across the northern California continental shelf along the Coastal Ocean Dynamics Experiment (CODE) “C” transect as part of the 1990–1991 Sediment Transport Events on Shelves and Slopes (STRESS) experiment. In combination with meteorological and wave data from the National Data Buoy Center Buoy 46013, these measurements provide information about the physical forcing and resultant resuspension and transport of bottom material between 21 November and 8 March. Sixteen events were identified in the wave, wind and current-meter records for this period. Only two were local storms with southerly winds, but they caused about half of the seasonal net transport. Seven were swell events that combined long-period waves generated by distant storms with local currents. At the 90-m site, swells interacted with the mean northward flow to produce northward transport. During six northerly wind events, upwelling-favorable winds often were sufficient to slow or reverse the mean northward flow and thus caused southward transport. A single current event, which produced moderate southward transport, was observed at the 130-m site. Net transport during the winter experiment was offshore at all sites, northward at the inner- and mid-shelf sites, but southward at the outer-shelf site. The results suggest that local storms with southerly winds may dominate seasonal transport, as on the Washington shelf, but significant transport also can occur during fair weather and during periods of northerly winds.

Bradford Butman

Papers

The Middle Atlantic Bight Cold Pool: Evolution of the Temperature Structure During Summer 1979

Long-term observations of bottom current and bottom sediment movement on the mid-Atlantic continental shelf

Modeling tidal exchange and dispersion in Boston Harbor

Atlas of tidal elevation and current observations on the Northeast American continental shelf and slope

Sediment-transport events on the northern California continental shelf during the 1990–1991 STRESS experiment