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Charlie Beirnaert

Researcher at University of Antwerp

Publications -  18
Citations -  422

Charlie Beirnaert is an academic researcher from University of Antwerp. The author has contributed to research in topics: Epitope & Metabolomics. The author has an hindex of 9, co-authored 18 publications receiving 277 citations.

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Asymmetric dyes align inside carbon nanotubes to yield a large nonlinear optical response

TL;DR: By including an elongated dipolar dye (p,p'-dimethylaminonitrostilbene, DANS, a prototypical asymmetric dye with a strong NLO response) inside single-walled carbon nanotubes (SWCNTs), an ideal head-to-tail alignment in which all electric dipoles point in the same sense is naturally created.
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On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition

TL;DR: A classification approach based on random forest classifiers to predict recognition of a peptide by a T cell receptor and discover patterns that contribute to recognition is developed and serves as a proof of concept for the prediction of immunogenic T cell epitopes and paves the way for more general and high-performing models.
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Plasma donor-derived cell-free DNA kinetics after kidney transplantation using a single tube multiplex PCR assay

TL;DR: Investigating the kinetics of this biomarker after transplantation and determining biological variables that influence ddcfDNA kinetics in stable and non-stable patients found it necessary to quantify ddcf DNA levels in plasma of kidney transplant recipients to investigate the role of ddCFDNA for rejection monitoring of the graft.
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speaq 2.0: A complete workflow for high-throughput 1D NMR spectra processing and quantification.

TL;DR: This completely revised framework to automatically analyze 1D NMR spectra uses wavelets to efficiently summarize the raw spectra with minimal information loss or user interaction and is distributed through the existing speaq R package to provide a complete solution for NMR data processing.