C
Christopher Vollmers
Researcher at University of California, Santa Cruz
Publications - 71
Citations - 6263
Christopher Vollmers is an academic researcher from University of California, Santa Cruz. The author has contributed to research in topics: Transcriptome & Gene. The author has an hindex of 25, co-authored 61 publications receiving 4867 citations. Previous affiliations of Christopher Vollmers include Stanford University & Heidelberg University.
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Patent
Monitoring immunocompetance using immune repertoire sequencing
TL;DR: In this article, machine readable media and kits are provided for analyzing an antibody repertoire of a subject to determine the immunocompetence of the subject, based on the analysis.
Posted ContentDOI
Illumina But With Nanopore: Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2
Alexander Zee,Dori Z. Q. Deng,Matthew Adams,Kayla D. Schimke,Russell Corbett-Detig,Shelbi L Russell,Xuan Zhang,Robert J. Schmitz,Christopher Vollmers +8 more
TL;DR: In this paper, the authors proposed a method to make short-read Illumina libraries compatible with the long-read ONT MinION by circularizing and rolling circle amplifying the short library molecules using the R2C2 method.
Posted ContentDOI
Detecting haplotype-specific transcript variation in long reads with FLAIR2
TL;DR: In this paper , a computational workflow was developed that augments FLAIR, a tool that calls isoform models expressed in long-read data, to integrate RNA variant calls with the associated isoforms that bear them.
Illumina But With Nanopore
Alexander Zee,Doris Z. Deng,Matthew Adams,Kayla D. Schimke,Russell Corbett-Detig,Shelbi L Russell,Xuan Zhang,Robert J. Schmitz,Christopher Vollmers +8 more
TL;DR: It is shown that short-read Illumina libraries can be compatible with the long-read ONT MinION by circularizing and rolling circle amplifying the short library molecules using the R2C2 method, which can be used to evaluate RNA-seq, ChIP-seq and enriched Tn5 libraries.
Journal ArticleDOI
Smar2C2: A Simple and Efficient Protocol for the Identification of Transcription Start Sites
TL;DR: In this paper , a template switching reverse transcriptase (TSRT) is used to identify the start site of the transcription process in the first strand synthesis of a cDNA copy of a transcript.