Deep learning has revolutionized many machine learning tasks in recent years, ranging from image classification and video processing to speech recognition and natural language understanding. The data in these tasks are typically represented in the Euclidean space. However, there is an increasing number of applications, where data are generated from non-Euclidean domains and are represented as graphs with complex relationships and interdependency between objects. The complexity of graph data has imposed significant challenges on the existing machine learning algorithms. Recently, many studies on extending deep learning approaches for graph data have emerged. In this article, we provide a comprehensive overview of graph neural networks (GNNs) in data mining and machine learning fields. We propose a new taxonomy to divide the state-of-the-art GNNs into four categories, namely, recurrent GNNs, convolutional GNNs, graph autoencoders, and spatial–temporal GNNs. We further discuss the applications of GNNs across various domains and summarize the open-source codes, benchmark data sets, and model evaluation of GNNs. Finally, we propose potential research directions in this rapidly growing field.

/pdf/a-comprehensive-survey-on-graph-neural-networks-4lw9i4v183.pdf

A Comprehensive Survey on Graph Neural Networks

Point clouds provide a flexible geometric representation suitable for countless applications in computer graphics; they also comprise the raw output of most 3D data acquisition devices. While hand-designed features on point clouds have long been proposed in graphics and vision, however, the recent overwhelming success of convolutional neural networks (CNNs) for image analysis suggests the value of adapting insight from CNN to the point cloud world. Point clouds inherently lack topological information, so designing a model to recover topology can enrich the representation power of point clouds. To this end, we propose a new neural network module dubbed EdgeConv suitable for CNN-based high-level tasks on point clouds, including classification and segmentation. EdgeConv acts on graphs dynamically computed in each layer of the network. It is differentiable and can be plugged into existing architectures. Compared to existing modules operating in extrinsic space or treating each point independently, EdgeConv has several appealing properties: It incorporates local neighborhood information; it can be stacked applied to learn global shape properties; and in multi-layer systems affinity in feature space captures semantic characteristics over potentially long distances in the original embedding. We show the performance of our model on standard benchmarks, including ModelNet40, ShapeNetPart, and S3DIS.

/pdf/dynamic-graph-cnn-for-learning-on-point-clouds-20wlcru9tg.pdf

Dynamic Graph CNN for Learning on Point Clouds

Many scientific fields study data with an underlying structure that is non-Euclidean. Some examples include social networks in computational social sciences, sensor networks in communications, functional networks in brain imaging, regulatory networks in genetics, and meshed surfaces in computer graphics. In many applications, such geometric data are large and complex (in the case of social networks, on the scale of billions) and are natural targets for machine-learning techniques. In particular, we would like to use deep neural networks, which have recently proven to be powerful tools for a broad range of problems from computer vision, natural-language processing, and audio analysis. However, these tools have been most successful on data with an underlying Euclidean or grid-like structure and in cases where the invariances of these structures are built into networks used to model them.

Geometric Deep Learning: Going beyond Euclidean data

Lots of learning tasks require dealing with graph data which contains rich relation information among elements. Modeling physics systems, learning molecular fingerprints, predicting protein interface, and classifying diseases demand a model to learn from graph inputs. In other domains such as learning from non-structural data like texts and images, reasoning on extracted structures (like the dependency trees of sentences and the scene graphs of images) is an important research topic which also needs graph reasoning models. Graph neural networks (GNNs) are neural models that capture the dependence of graphs via message passing between the nodes of graphs. In recent years, variants of GNNs such as graph convolutional network (GCN), graph attention network (GAT), graph recurrent network (GRN) have demonstrated ground-breaking performances on many deep learning tasks. In this survey, we propose a general design pipeline for GNN models and discuss the variants of each component, systematically categorize the applications, and propose four open problems for future research.

Graph Neural Networks: A Review of Methods and Applications

In the Hamadryas baboon, males are substantially larger than females. A troop of baboons is subdivided into a number of ‘one-male groups’, consisting of one adult male and one or more females with their young. The male prevents any of ‘his’ females from moving too far from him. Kummer (1971) performed the following experiment. Two males, A and B, previously unknown to each other, were placed in a large enclosure. Male A was free to move about the enclosure, but male B was shut in a small cage, from which he could observe A but not interfere. A female, unknown to both males, was then placed in the enclosure. Within 20 minutes male A had persuaded the female to accept his ownership. Male B was then released into the open enclosure. Instead of challenging male A , B avoided any contact, accepting A’s ownership.

Evolution and the Theory of Games

Shape correspondence is a fundamental problem in computer graphics and vision, with applications in various problems including animation, texture mapping, robotic vision, medical imaging, archaeology and many more. In settings where the shapes are allowed to undergo non-rigid deformations and only partial views are available, the problem becomes very challenging. To this end, we present a non-rigid multi-part shape matching algorithm. We assume to be given a reference shape and its multiple parts undergoing a non-rigid deformation. Each of these query parts can be additionally contaminated by clutter, may overlap with other parts, and there might be missing parts or redundant ones. Our method simultaneously solves for the segmentation of the reference model, and for a dense correspondence to (subsets of) the parts. Experimental results on synthetic as well as real scans demonstrate the effectiveness of our method in dealing with this challenging matching scenario.

Non-rigid puzzles

We consider a parametrized relaxation of the widely adopted quadratic assignment problem (QAP) formulation for minimum distortion correspondence between deformable shapes. In order to control the accuracy/sparsity trade-off we introduce a weighting parameter on the combination of two existing relaxations, namely spectral and game-theoretic. This leads to the introduction of the elastic net penalty function into shape matching problems. In combination with an efficient algorithm to project onto the elastic net ball, we obtain an approach for deformable shape matching with controllable sparsity. Experiments on a standard benchmark confirm the effectiveness of the approach.

https://vision.in.tum.de/_media/spezial/bib/rodola-iccv13.pdf

Elastic Net Constraints for Shape Matching

We present a simple and efficient method for refining maps or correspondences by iterative upsampling in the spectral domain that can be implemented in a few lines of code. Our main observation is that high quality maps can be obtained even if the input correspondences are noisy or are encoded by a small number of coefficients in a spectral basis. We show how this approach can be used in conjunction with existing initialization techniques across a range of application scenarios, including symmetry detection, map refinement across complete shapes, non-rigid partial shape matching and function transfer. In each application we demonstrate an improvement with respect to both the quality of the results and the computational speed compared to the best competing methods, with up to two orders of magnitude speed-up in some applications. We also demonstrate that our method is both robust to noisy input and is scalable with respect to shape complexity. Finally, we present a theoretical justification for our approach, shedding light on structural properties of functional maps.

ZoomOut: Spectral Upsampling for Efficient Shape Correspondence

Action recognition in video sequences is an interesting field for many computer vision applications, including behavior analysis, event recognition, and video surveillance. In this article, a method based on 2D skeleton and two-branch stacked Recurrent Neural Networks (RNNs) with Long Short-Term Memory (LSTM) cells is proposed. Unlike 3D skeletons, usually generated by RGB-D cameras, the 2D skeletons adopted in this article are reconstructed starting from RGB video streams, therefore allowing the use of the proposed approach in both indoor and outdoor environments. Moreover, any case of missing skeletal data is managed by exploiting 3D-Convolutional Neural Networks (3D-CNNs). Comparative experiments with several key works on KTH and Weizmann datasets show that the method described in this paper outperforms the current state-of-the-art. Additional experiments on UCF Sports and IXMAS datasets demonstrate the effectiveness of our method in the presence of noisy data and perspective changes, respectively. Further investigations on UCF Sports, HMDB51, UCF101, and Kinetics400 highlight how the combination between the proposed two-branch stacked LSTM and the 3D-CNN-based network can manage missing skeleton information, greatly improving the overall accuracy. Moreover, additional tests on KTH and UCF Sports datasets also show the robustness of our approach in the presence of partial body occlusions. Finally, comparisons on UT-Kinect and NTU-RGB+D datasets show that the accuracy of the proposed method is fully comparable to that of works based on 3D skeletons.

Emanuele Rodolà

Papers

Non-rigid puzzles

Elastic Net Constraints for Shape Matching

ZoomOut: Spectral Upsampling for Efficient Shape Correspondence

2-D Skeleton-Based Action Recognition via Two-Branch Stacked LSTM-RNNs

Fast and accurate surface alignment through an isometry-enforcing game