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Eric A. Dubinsky
Researcher at Lawrence Berkeley National Laboratory
Publications - 27
Citations - 3765
Eric A. Dubinsky is an academic researcher from Lawrence Berkeley National Laboratory. The author has contributed to research in topics: Petroleum & Fecal coliform. The author has an hindex of 19, co-authored 26 publications receiving 3311 citations. Previous affiliations of Eric A. Dubinsky include University of California, Berkeley.
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Journal ArticleDOI
Deep-sea oil plume enriches indigenous oil-degrading bacteria.
Terry C. Hazen,Eric A. Dubinsky,Todd Z. DeSantis,Gary L. Andersen,Yvette M. Piceno,Navjeet Singh,Janet K. Jansson,Alexander J. Probst,Sharon Borglin,Julian L. Fortney,William T. Stringfellow,William T. Stringfellow,Markus Bill,Mark E. Conrad,Lauren M. Tom,Krystle L. Chavarria,Thana R. Alusi,Regina Lamendella,Dominique C. Joyner,Chelsea Spier,Jacob Bælum,Manfred Auer,Marcin Zemla,Romy Chakraborty,Eric Sonnenthal,Patrik D'haeseleer,Hoi-Ying N. Holman,Shariff Osman,Zhenmei Lu,Joy D. Van Nostrand,Ye Deng,Jizhong Zhou,Jizhong Zhou,Olivia U. Mason +33 more
TL;DR: It is reported that the dispersed hydrocarbon plume stimulated deep-sea indigenous γ-Proteobacteria that are closely related to known petroleum degraders, and the potential exists for intrinsic bioremediation of the oil plume in the deep-water column without substantial oxygen drawdown.
Journal ArticleDOI
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
Olivia U. Mason,Olivia U. Mason,Terry C. Hazen,Terry C. Hazen,Sharon Borglin,Patrick S. G. Chain,Patrick S. G. Chain,Eric A. Dubinsky,Julian L. Fortney,James Han,James Han,Hoi-Ying N. Holman,Jenni Hultman,Regina Lamendella,Rachel Mackelprang,Stephanie Malfatti,Stephanie Malfatti,Lauren M. Tom,Susannah G. Tringe,Tanja Woyke,Jizhong Zhou,Jizhong Zhou,Edward M. Rubin,Janet K. Jansson,Janet K. Jansson +24 more
TL;DR: The draft genome included genes for chemotaxis, motility and nutrient acquisition strategies that were also identified in the metagenomes and metatranscriptomes, which point towards a rapid response of members of the Oceanospirillales to aliphatic hydrocarbons in the deep sea.
Journal ArticleDOI
Succession of hydrocarbon-degrading bacteria in the aftermath of the deepwater horizon oil spill in the gulf of Mexico.
Eric A. Dubinsky,Mark E. Conrad,Romy Chakraborty,Markus Bill,Sharon Borglin,James T. Hollibaugh,Olivia U. Mason,Olivia U. Mason,Yvette M. Piceno,Francine C. Reid,William T. Stringfellow,Lauren M. Tom,Terry C. Hazen,Terry C. Hazen,Gary L. Andersen +14 more
TL;DR: The Deepwater Horizon oil spill produced large subsurface plumes of dispersed oil and gas in the Gulf of Mexico that stimulated growth of psychrophilic, hydrocarbon degrading bacteria, but their relative importance was controlled by changes in hydrocarbon supply.
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Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume
Zhenmei Lu,Zhenmei Lu,Ye Deng,Joy D. Van Nostrand,Zhili He,James W. Voordeckers,Aifen Zhou,Yong-Jin Lee,Olivia U. Mason,Eric A. Dubinsky,Krystle L. Chavarria,Lauren M. Tom,Julian L. Fortney,Regina Lamendella,Janet K. Jansson,Patrik D'haeseleer,Terry C. Hazen,Jizhong Zhou,Jizhong Zhou,Jizhong Zhou +19 more
TL;DR: It is shown that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep sea.
Journal ArticleDOI
Integrating microbial ecology into ecosystem models: challenges and priorities
Kathleen K. Treseder,Teri C. Balser,Mark A. Bradford,Eoin L. Brodie,Eric A. Dubinsky,Valerie T. Eviner,Kirsten S. Hofmockel,Jay T. Lennon,Uri Y. Levine,Barbara J. MacGregor,Jennifer Pett-Ridge,Mark P. Waldrop +11 more
TL;DR: In this paper, the authors examined the extent to which incorporation of microbial ecology into ecosystem models improves predictions of carbon dynamics under warming, changes in precipitation regime, and anthropogenic nitrogen enrichment.