J
James B. Procter
Researcher at University of Dundee
Publications - 26
Citations - 11061
James B. Procter is an academic researcher from University of Dundee. The author has contributed to research in topics: Web service & Multiple sequence alignment. The author has an hindex of 14, co-authored 26 publications receiving 8851 citations. Previous affiliations of James B. Procter include University of Hamburg & Australian National University.
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Jalview Version 2--a multiple sequence alignment editor and analysis workbench.
TL;DR: Jalview 2 is a system for interactive WYSIWYG editing, analysis and annotation of multiple sequence alignments that employs web services for sequence alignment, secondary structure prediction and the retrieval of alignments, sequences, annotation and structures from public databases and any DAS 1.53 compliant sequence or annotation server.
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JPred4: a protein secondary structure prediction server
TL;DR: JPred4 as discussed by the authors is the latest version of the popular JPred protein secondary structure prediction server which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure predictions.
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JPred4: A protein secondary structure prediction server
TL;DR: The JPred4 web server has been re-implemented in the Bootstrap framework and JavaScript to improve its design, usability and accessibility from mobile devices and the help-pages have been updated and tool-tips added as well as step-by-step tutorials.
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Phosphoproteomic screening identifies Rab GTPases as novel downstream targets of PINK1
Yu-Chiang Lai,Chandana Kondapalli,Ronny Lehneck,James B. Procter,Brian D. Dill,Helen I. Woodroof,Robert Gourlay,Mark Peggie,Thomas Macartney,Olga Corti,Jean-Christophe Corvol,David G. Campbell,Aymelt Itzen,Matthias Trost,Miratul M. K. Muqit +14 more
TL;DR: These findings provide the first evidence that PINK1 is able to regulate the phosphorylation of Rab GTPases and indicate that monitoring phosphorylated members of Rab8A/8B/13 at Ser111 may represent novel biomarkers of Pink1 activity in vivo.
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MSAViewer: interactive JavaScript visualization of multiple sequence alignments
Guy Yachdav,Sebastian Wilzbach,Benedikt Rauscher,Robert L. Sheridan,Ian Sillitoe,James B. Procter,Suzanna E. Lewis,Burkhard Rost,Tatyana Goldberg +8 more
TL;DR: The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size that is compatible with modern web browsers and does not require any specialized software.