抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

Recent experiments, advances in theory, and analogies to other complex systems such as glasses and spin glasses yield insight into protein dynamics. The basis of the understanding is the observation that the energy landscape is complex: Proteins can assume a large number of nearly isoenergetic conformations (conformational substates). The concepts that emerge from studies of the conformational substates and the motions between them permit a quantitative discussion of one simple reaction, the binding of small ligands such as carbon monoxide to myoglobin.

https://science.sciencemag.org/content/sci/254/5038/1598.full.pdf

The energy landscapes and motions of proteins.

Terahertz spectroscopy systems use far-infrared radiation to extract molecular spectral information in an otherwise inaccessible portion of the electromagnetic spectrum. Materials research is an essential component of modern terahertz systems: novel, higher-power terahertz sources rely heavily on new materials such as quantum cascade structures. At the same time, terahertz spectroscopy and imaging provide a powerful tool for the characterization of a broad range of materials, including semiconductors and biomolecules.

Materials for terahertz science and technology

Homochiral Metal–Organic Frameworks for Asymmetric Heterogeneous Catalysis

The rise time of intense radiation determines the maximum field strength atoms can be exposed to before their polarizability dramatically drops due to the detachment of an outer electron. Recent progress in ultrafast optics has allowed the generation of ultraintense light pulses comprising merely a few field oscillation cycles. The arising intensity gradient allows electrons to survive in their bound atomic state up to external field strengths many times higher than the binding Coulomb field and gives rise to ionization rates comparable to the light frequency, resulting in a significant extension of the frontiers of nonlinear optics and (nonrelativistic) high-field physics. Implications include the generation of coherent harmonic radiation up to kiloelectronvolt photon energies and control of the atomic dipole moment on a subfemtosecond $(1{\mathrm{f}\mathrm{s}=10}^{\mathrm{\ensuremath{-}}15}\mathrm{}\mathrm{s})$ time scale. This review presents the landmarks of the 30-odd-year evolution of ultrashort-pulse laser physics and technology culminating in the generation of intense few-cycle light pulses and discusses the impact of these pulses on high-field physics. Particular emphasis is placed on high-order harmonic emission and single subfemtosecond extreme ultraviolet/x-ray pulse generation. These as well as other strong-field processes are governed directly by the electric-field evolution, and hence their full control requires access to the (absolute) phase of the light carrier. We shall discuss routes to its determination and control, which will, for the first time, allow access to the electromagnetic fields in light waves and control of high-field interactions with never-before-achieved precision.

Intense few-cycle laser fields: Frontiers of nonlinear optics

Multicolour near-infrared femtosecond experiments of a genetically modified bacterial reaction centre show that the phase of two excited-state vibrational modes is conserved for a period of picoseconds over a large range of temperatures. The direct visualization of low-frequency nuclear vibrations in this protein, which is embedded in its natural membrane, implicates coherent nuclear motion in the primary electron transfer reaction in functional reaction centres.

Visualization of coherent nuclear motion in a membrane protein by femtosecond spectroscopy

The localization and solvation of excess electrons in pure water have been resolved at the femtosecond time scale. Before it becomes solvated, the electron thermalizes and reaches in 110 fs a localized state absorbing in the infrared. This transient species with lifetime 240 fs has been postulated to exist but has not been observed previously in liquid water.

Excess electrons in liquid water: First evidence of a prehydrated state with femtosecond lifetime

The extension of time-resolved X-ray diffraction to the subpicosecond domain is an important challenge, as the nature of chemical reactions and phase transitions is determined by atomic motions on these timescales. An ultimate goal is to study the structure of transient states with a time resolution shorter than the typical period of vibration along a reaction coordinate (around 100 fs). Biological processes that can be initiated optically have been studied extensively by ultrafast infrared, visible and ultraviolet spectroscopy1. But these techniques probe only electronic states, whereas time-resolved crystallography should be able to directly monitor atomic positions. Here we show that changes in the X-ray diffraction pattern from an organic film heated by a laser pulse can be monitored on a timescale of less than a picosecond. We have studied the response of a Langmuir–Blodgett multilayer film of cadmium arachidate to laser heating by observing changes in the intensity of one Bragg peak for different delays between the perturbing optical pulse and the X-ray probe pulse. A strong decrease in intensity is seen within a picosecond of heating, resulting from disorder introduced to the layers of cadmium atoms before thermal expansion of the film (which ultimately leads to its destruction) has time to occur.

Femtosecond time-resolved X-ray diffraction from laser-heated organic films

The conversion of light energy to chemical energy during photosyn-thesis involves the transfer of electrons between pigments embedded in a membrane protein. This process occurs with high quantum efficiency, the result of extremely fast electron transfer over a long distance preventing back transfer and energy loss. Recently the three-dimensional structures of the photosynthetic reaction centres of the bacteria Rhodopseudomonas viridis1 and Rhodobacter sphaeroides2 have been determined, allowing a molecular descrip-tion of the primary charge separation process. There are two symmetrically related branches of pigments in the structure (L and M), extending from the special pair of bacteriochlorophyll molecules (P) to the two bacteriopheophytins (HL and HM) via two bacteriochlorophylls (BLand BM). Many features of the electron transfer process are poorly understood, such as the nature of the excited states involved, the identity of the primary charge separation step and the roles of the protein and of B3–13. We have determined the rates of electron transfer in isolated reaction centre complexes of Rps. viridis and Rb. sphaeroides as a function of temperature. The rates increase as temperature is decreased, which may be due to either changes in electronic coupling of the pigments or changes in the population of coupled vibrational modes, or a combination of the two. We see no evidence of a B−L intermediate, which sets a lower limit on the rate of electron transfer from BL to HL. This is so high as to rule out transfer by two non-adiabatic steps.

Jean-Louis Martin

Papers

Visualization of coherent nuclear motion in a membrane protein by femtosecond spectroscopy

Excess electrons in liquid water: First evidence of a prehydrated state with femtosecond lifetime

Femtosecond time-resolved X-ray diffraction from laser-heated organic films

Rates of primary electron transfer in photosynthetic reaction centres and their mechanistic implications

Myosin isoenzymic distribution correlates with speed of myocardial contraction.