J
Jesse R. Zaneveld
Researcher at University of Washington
Publications - 42
Citations - 56232
Jesse R. Zaneveld is an academic researcher from University of Washington. The author has contributed to research in topics: Microbiome & Coral. The author has an hindex of 28, co-authored 37 publications receiving 40213 citations. Previous affiliations of Jesse R. Zaneveld include University of Colorado Boulder & Oregon State University.
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Journal ArticleDOI
Climate change stressors destabilize the microbiome of the Caribbean barrel sponge, Xestospongia muta
TL;DR: The results show that ocean acidification alone, as well as its interaction with elevated seawater temperature, has significant effects on the sponge microbiome, leading to a decline in the productivity potential of the symbiotic cyanobacteria in these sponges.
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Bacterial predation in a marine host-associated microbiome.
Rory M. Welsh,Jesse R. Zaneveld,Stephanie M. Rosales,Jérôme P. Payet,Deron E. Burkepile,Deron E. Burkepile,Rebecca Vega Thurber +6 more
TL;DR: It is shown that predatory bacteria of the genus Halobacteriovorax are prevalent and active predators on the surface of several genera of reef-building corals, and it is suggested that this bacterial predator’s abundance may be driven by prey availability.
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Alien vs. predator: bacterial challenge alters coral microbiomes unless controlled by Halobacteriovorax predators
Rory M. Welsh,Stephanie M. Rosales,Jesse R. Zaneveld,Jesse R. Zaneveld,Jérôme P. Payet,Ryan McMinds,Steven L. Hubbs,Rebecca Vega Thurber +7 more
TL;DR: The data suggest that, under certain circumstances, host-associated bacterial predators may mitigate the ability of other bacteria to destabilize the microbiome.
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RNASTAR: An RNA STructural Alignment Repository that provides insight into the evolution of natural and artificial RNAs
Jeremy Widmann,Jesse Stombaugh,Daniel McDonald,Jana Chocholousova,Paul P. Gardner,Matthew K. Iyer,Zongzhi Liu,Catherine A. Lozupone,John Quinn,Sandra Smit,Shandy Wikman,Jesse R. Zaneveld,Rob Knight +12 more
TL;DR: A set of 148 alignments with a total of 9600 unique sequences, in which each alignment was backed by at least one crystal or NMR structure, were curated to improve the alignments from an average of 83%-94% isosteric base pairs.
Journal ArticleDOI
Combined phylogenetic and genomic approaches for the high-throughput study of microbial habitat adaptation
Jesse R. Zaneveld,Laura Wegener Parfrey,Will Van Treuren,Catherine A. Lozupone,Jose C. Clemente,Dan Knights,Jesse Stombaugh,Justin Kuczynski,Rob Knight,Rob Knight +9 more
TL;DR: This work reviews recent large-scale studies of habitat adaptation, with emphasis on those that utilize phylogenetic techniques, and summarizes methodological challenges faced by investigators and the tools, techniques and analytical approaches available to overcome them.