J
Johanna Geuder
Researcher at Ludwig Maximilian University of Munich
Publications - 9
Citations - 208
Johanna Geuder is an academic researcher from Ludwig Maximilian University of Munich. The author has contributed to research in topics: Biology & Induced pluripotent stem cell. The author has an hindex of 3, co-authored 6 publications receiving 112 citations.
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Journal ArticleDOI
Sensitive and powerful single-cell RNA sequencing using mcSCRB-seq
Johannes W. Bagnoli,Christoph Ziegenhain,Christoph Ziegenhain,Aleksandar Janjic,Lucas E. Wange,Beate Vieth,Swati Parekh,Swati Parekh,Johanna Geuder,Ines Hellmann,Wolfgang Enard +10 more
TL;DR: This work systematically evaluates experimental conditions of this protocol and finds that adding polyethylene glycol considerably increases sensitivity by enhancing cDNA synthesis and using Terra polymerase increases efficiency due to a more even cDNA amplification that requires less sequencing of libraries.
Journal ArticleDOI
A non-invasive method to generate induced pluripotent stem cells from primate urine
Johanna Geuder,Lucas E. Wange,Aleksandar Janjic,Jessica Radmer,Philipp Janssen,Johannes W. Bagnoli,Stefan C. Müller,Artur Kaul,Mari Ohnuki,Wolfgang Enard +9 more
TL;DR: In this article, the authors reported the generation of primate induced pluripotent stem cells (iPSCs) from urine samples and showed that suspension-sendai virus transduction of reprogramming factors into urinary cells efficiently generates integration-free iPSCs which maintain their pluripotency under feeder-free culture conditions.
Journal ArticleDOI
Prime-seq, efficient and powerful bulk RNA sequencing
Aleksandar Janjic,Lucas E. Wange,Johannes W. Bagnoli,Johanna Geuder,Phong Nguyen,Daniel Richter,Beate Vieth,Binje Vick,Irmela Jeremias,Christoph Ziegenhain,Ines Hellmann,Wolfgang Enard +11 more
TL;DR: In this paper , the authors optimize and validate prime-seq, an early barcoding bulk RNA-seq method, and show that it performs equivalently to TruSeq, but is four times more cost-efficient due to almost 50 times cheaper library costs.
Posted ContentDOI
A non-invasive method to generate induced pluripotent stem cells from primate urine
Johanna Geuder,Mari Ohnuki,Lucas E. Wange,Aleksandar Janjic,Johannes W. Bagnoli,Stefan C. Müller,Artur Kaul,Wolfgang Enard +7 more
TL;DR: This study introduces a novel and efficient approach to generate iPSCs non-invasively from primate urine, which will allow to extend the zoo of species available for a comparative approach to molecular and cellular phenotypes.
Posted ContentDOI
mcSCRB-seq: sensitive and powerful single-cell RNA sequencing
Johannes W. Bagnoli,Christoph Ziegenhain,Aleksandar Janjic,Lucas E. Wange,Beate Vieth,Swati Parekh,Johanna Geuder,Ines Hellmann,Wolfgang Enard +8 more
TL;DR: Adding polyethylene glycol considerably increases sensitivity and using Terra polymerase increases efficiency due to a more even cDNA amplification that requires less sequencing of libraries, combined with other improvements to a new scRNA-seq library protocol, which is shown to be the most sensitive and one of the most efficient and flexible sc RNA-seq methods to date.