K
Ketan Patel
Researcher at University of North Carolina at Charlotte
Publications - 5
Citations - 304
Ketan Patel is an academic researcher from University of North Carolina at Charlotte. The author has contributed to research in topics: Alternative splicing & Gene. The author has an hindex of 4, co-authored 5 publications receiving 276 citations.
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Journal ArticleDOI
RNA-Seq of Arabidopsis Pollen Uncovers Novel Transcription and Alternative Splicing
TL;DR: The robustness of splicing patterns in plants is highlighted and the importance of ongoing annotation and visualization of RNA-Seq data using interactive tools such as Integrated Genome Browser is highlighted.
Journal ArticleDOI
Mining Arabidopsis thaliana RNA-seq data with Integrated Genome Browser reveals stress-induced alternative splicing of the putative splicing regulator SR45a
TL;DR: It is shown that heat and dehydration stresses increase overall abundance ofSR45a mRNA while also increasing production of transcripts encoding the full-length SR45a protein relative to other splice variants, highlighting the importance of visual inspection of RNA-seq alignments when investigating alternatively spliced genes.
Journal ArticleDOI
Prevalence of alternative splicing choices in Arabidopsis thaliana
TL;DR: Prevalence of alternative splicing events in Arabidopsis thaliana using ESTs found that for most AS events with ample EST coverage, the majority of overlapping ESTs strongly supported one major splicing choice, with less than 10% of ESTs supporting the minor form.
Book ChapterDOI
A protocol for visual analysis of alternative splicing in RNA-Seq data using integrated genome browser.
TL;DR: The Integrated Genome Browser software program is a free and flexible desktop tool that enables discovery and quantification of alternative splicing of Arabidopsis thaliana LHY, a circadian clock regulator, and a cold-stress RNA-Seq data set is used.
Posted Content
candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage- 2 specific alternative splicing 3
Vikas Gupta,April D. Estrada,Ivory C. Blakley,Robert W. Reid,Ketan Patel,Mason D. Meyer,Stig U. Andersen,Allan Brown,Mary Ann Lila,Ann E. Loraine +9 more
TL;DR: A study has shown that blueberries are a rich source of antioxidants and other beneficial compounds that can be passed on to the immune system through contact chemoreception and other mechanisms.