L
Li Zheng
Researcher at J. Craig Venter Institute
Publications - 3
Citations - 1312
Li Zheng is an academic researcher from J. Craig Venter Institute. The author has contributed to research in topics: Genome project & Genome. The author has an hindex of 3, co-authored 3 publications receiving 1185 citations.
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Journal ArticleDOI
The TIGR Rice Genome Annotation Resource: Improvements and New Features
Shu Ouyang,Wei Zhu,John A. Hamilton,Haining Lin,Matthew Campbell,Kevin L. Childs,Françoise Thibaud-Nissen,Renae L. Malek,Yuandan Lee,Li Zheng,Joshua Orvis,Brian J. Haas,Jennifer R. Wortman,C. Robin Buell +13 more
TL;DR: Through incorporation of multiple transcript and proteomic expression data sets, the Institute for Genomic Research has been able to annotate 24 799 genes (31 739 gene models), representing ∼50% of the total gene models, as expressed in the rice genome.
Journal ArticleDOI
Refinement of Light-Responsive Transcript Lists Using Rice Oligonucleotide Arrays: Evaluation of Gene-Redundancy
Ki-Hong Jung,Chris Dardick,Laura E. Bartley,Peijian Cao,Jirapa Phetsom,Patrick E. Canlas,Young Su Seo,Michael A. Shultz,Shu Ouyang,Qiaoping Yuan,Bryan C. Frank,Eugene Ly,Li Zheng,Yi Jia,An-Ping Hsia,Kyungsook An,Hui-Hsien Chou,David M. Rocke,Geun Cheol Lee,Patrick S. Schnable,Gynheung An,C. Robin Buell,Pamela C. Ronald +22 more
TL;DR: An inexpensive and publicly available rice oligonucleotide near-whole genome array is constructed and validated, called the rice NSF45K array, and the efficacy of this method to cope with redundancy is confirmed by correctly predicting participation in photorespiration of a gene with five paralogs.
Journal ArticleDOI
Expressed sequence tags from loblolly pine embryos reveal similarities with angiosperm embryogenesis.
John Cairney,Li Zheng,Allison Cowels,Joseph Hsiao,Victoria Zismann,Jia Liu,Shu Ouyang,Françoise Thibaud-Nissen,John P. Hamilton,Kevin L. Childs,Gerald S. Pullman,Yiting Zhang,Thomas J. Oh,C. Robin Buell +13 more
TL;DR: Four cDNA libraries constructed from un-normalized, normalized, and subtracted RNA populations of zygotic and somatic embryos of loblolly pine revealed that pine contains similar genes for embryogenesis and that the RNA sampling methods were successful.