M
Midori A. Harris
Researcher at University of Cambridge
Publications - 51
Citations - 49951
Midori A. Harris is an academic researcher from University of Cambridge. The author has contributed to research in topics: Ontology (information science) & Open Biomedical Ontologies. The author has an hindex of 32, co-authored 51 publications receiving 42662 citations. Previous affiliations of Midori A. Harris include University College London & California Institute of Technology.
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Journal ArticleDOI
A short study on the success of the Gene Ontology
Michael Bada,Robert Stevens,Carole Goble,Yolanda Gil,Michael Ashburner,Judith A. Blake,J. Michael Cherry,Midori A. Harris,Suzanna E. Lewis +8 more
TL;DR: The Gene Ontology (GO), an evolving structured controlled vocabulary of nearly 16,000 terms in the domain of biological functionality, has been widely used for annotation of biological-database entries and in biomedical research.
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PomBase 2015: updates to the fission yeast database
Mark D. McDowall,Midori A. Harris,Antonia Lock,Kim Rutherford,Daniel M. Staines,Jürg Bähler,Paul J. Kersey,Stephen G. Oliver,Valerie Wood +8 more
TL;DR: PomBase provides a central hub for the fission yeast community, supporting both exploratory and hypothesis-driven research, and provides users easy access to data ranging from the sequence level, to molecular and phenotypic annotations, through to the display of genome-wide high-throughput studies.
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A method for increasing expressivity of Gene Ontology annotations using a compositional approach.
Rachael P. Huntley,Midori A. Harris,Yasmin Alam-Faruque,Judith A. Blake,Seth Carbon,Heiko Dietze,Emily Dimmer,Rebecca E. Foulger,David P. Hill,Varsha K. Khodiyar,Antonia Lock,Jane Lomax,Ruth C. Lovering,Prudence Mutowo-Meullenet,Tony Sawford,Kimberly Van Auken,Valerie Wood,Christopher J. Mungall +17 more
TL;DR: The additional contextual information captured by annotation extensions improves the utility of functional annotation by representing dependencies between annotations to terms in the different ontologies of GO, external ontologies, or an organism’s gene products.
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Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data
Catherine A. Ball,Heng Jin,Gavin Sherlock,Shuai Weng,John C. Matese,Rey Andrada,Gail Binkley,Kara Dolinski,Selina S. Dwight,Midori A. Harris,Laurie Issel-Tarver,Mark Schroeder,David Botstein,J. Michael Cherry +13 more
TL;DR: Together, the tools form a central resource for querying multiple large-scale analysis projects for data about individual genes, and provide information from diverse projects that shed light on the role a gene product plays in the cell.
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Hidden in plain sight: what remains to be discovered in the eukaryotic proteome?
TL;DR: This work defines characterized and uncharacterized proteins for human, budding yeast and fission yeast, and identifies a set of conserved but unstudied proteins in S. pombe, and classify them based on a combination of orthogonal attributes determined by large-scale experimental and comparative methods.