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J. Michael Cherry

Researcher at Stanford University

Publications -  129
Citations -  31837

J. Michael Cherry is an academic researcher from Stanford University. The author has contributed to research in topics: Genome & ENCODE. The author has an hindex of 57, co-authored 125 publications receiving 26442 citations. Previous affiliations of J. Michael Cherry include University of California, Berkeley & Princeton University.

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The genome sequence of Drosophila melanogaster

Mark Raymond Adams, +194 more
- 24 Mar 2000 - 
TL;DR: The nucleotide sequence of nearly all of the approximately 120-megabase euchromatic portion of the Drosophila genome is determined using a whole-genome shotgun sequencing strategy supported by extensive clone-based sequence and a high-quality bacterial artificial chromosome physical map.
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Annotation of functional variation in personal genomes using RegulomeDB

TL;DR: A novel approach and database, RegulomeDB, which guides interpretation of regulatory variants in the human genome, which includes high-throughput, experimental data sets from ENCODE and other sources, as well as computational predictions and manual annotations to identify putative regulatory potential and identify functional variants.
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The Gene Ontology resource: enriching a GOld mine

Seth Carbon, +179 more
TL;DR: A historical archive covering the past 15 years of GO data with a consistent format and file structure for both the ontology and annotations is made available to maintain consistency with other ontologies.
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GO: :TermFinder---open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

TL;DR: GO::TermFinder comprises a set of object-oriented Perl modules for accessing Gene Ontology information and evaluating and visualizing the collective annotation of a list of genes to GO terms, which can be used to draw conclusions from microarray and other biological data.
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Saccharomyces Genome Database: the genomics resource of budding yeast

TL;DR: The Saccharomyces Genome Database is an encyclopedia of the yeast genome, its chromosomal features, their functions and interactions, and public access to these data is provided to researchers and educators via web pages designed for optimal ease of use.