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Showing papers by "Peter W. Andrews published in 2012"


Journal ArticleDOI
11 Oct 2012-Nature
TL;DR: A protocol to induce differentiation from human embryonic stem cells (hESCs) using signals involved in the initial specification of the otic placode results in two types of otic progenitors able to differentiate in vitro into hair-cell-like cells and auditory neurons that display expected electrophysiological properties.
Abstract: Deafness is a condition with a high prevalence worldwide, produced primarily by the loss of the sensory hair cells and their associated spiral ganglion neurons (SGNs). Of all the forms of deafness, auditory neuropathy is of particular concern. This condition, defined primarily by damage to the SGNs with relative preservation of the hair cells1, is responsible for a substantial proportion of patients with hearing impairment2. Although the loss of hair cells can be circumvented partially by a cochlear implant, no routine treatment is available for sensory neuron loss, as poor innervation limits the prospective performance of an implant3. Using stem cells to recover the damaged sensory circuitry is a potential therapeutic strategy. Here we present a protocol to induce differentiation from human embryonic stem cells (hESCs) using signals involved in the initial specification of the otic placode. We obtained two types of otic progenitors able to differentiate in vitro into hair-cell-like cells and auditory neurons that display expected electrophysiological properties. Moreover, when transplanted into an auditory neuropathy model, otic neuroprogenitors engraft, differentiate and significantly improve auditory-evoked response thresholds. These results should stimulate further research into the development of a cell-based therapy for deafness.

322 citations


Journal ArticleDOI
TL;DR: The data suggest that pluripotent cells control genome integrity by the elimination of damaged cells through apoptosis rather than DNA repair, and therefore, mutations or epigenetic modifications resulting in an imbalance in cell death control could lead to genetic instability.
Abstract: Pluripotent cells of the early embryo, to which embryonic stem cells (ESCs) correspond, give rise to all the somatic cells of the developing fetus. Any defects that occur in their genome or epigenome would have devastating consequences. Genetic and epigenetic change in human ESCs appear to be an inevitable consequence of long-term culture, driven by selection of variant cells that have a higher propensity for self-renewal rather than either differentiation or death. Mechanisms underlying the potentially separate events of mutation and subsequent selection of variants are poorly understood. Here, we show that human ESCs and their malignant counterpart, embryonal carcinoma (EC) cells, both fail to activate critical S-phase checkpoints when exposed to DNA replication inhibitors and commit to apoptosis instead. Human ESCs and EC cells also fail to form replication protein A, γH2AX, or RAD51 foci or load topoisomerase (DNA) II binding protein 1 onto chromatin in response to replication inhibitors. Furthermore, direct measurements of single-stranded DNA (ssDNA) show that these cells fail to generate the ssDNA regions in response to replication stress that are necessary for the activation of checkpoints and the initiation of homologous recombination repair to protect replication fork integrity and restart DNA replication. Taken together, our data suggest that pluripotent cells control genome integrity by the elimination of damaged cells through apoptosis rather than DNA repair, and therefore, mutations or epigenetic modifications resulting in an imbalance in cell death control could lead to genetic instability.

78 citations


Journal ArticleDOI
TL;DR: It is demonstrated that, due to deficient DNA damage response, the modest NER activity in hESCs is insufficient to prevent increased mutagenesis, providing for the appearance of genetically aberrant h ESCs, paving the way for further major genetic changes.
Abstract: Human embryonic stem cells (hESCs) tend to lose genomic integrity during long periods of culture in vitro and to acquire a cancer-like phenotype. In this study, we aim at understanding the contribution of point mutations to the adaptation process and at providing a mechanistic explanation for their accumulation. We observed that, due to the absence of p21/Waf1/Cip1, cultured hESCs lack proper cell cycle checkpoints and are vulnerable to the kind of DNA damage usually repaired by the highly versatile nucleotide excision repair (NER) pathway. In response to UV-induced DNA damage, the majority of hESCs succumb to apoptosis; however, a subpopulation continues to proliferate, carrying damaged DNA and accumulating point mutations with a typical UV-induced signature. The UV-resistant cells retain their proliferative capacity and potential for pluripotent differentiation and are markedly less apoptotic to subsequent UV exposure. These findings demonstrate that, due to deficient DNA damage response, the modest NER activity in hESCs is insufficient to prevent increased mutagenesis. This provides for the appearance of genetically aberrant hESCs, paving the way for further major genetic changes.

55 citations


Journal ArticleDOI
TL;DR: The International Stem Forum Ethics Working Party's Policy Statement is presented and trust that it will stimulate debate and meet the concerns of researchers and research participants alike.
Abstract: Prompted by an increased interest of both research participants and the patient advocacy community in obtaining information about research outcomes and on the use of their biological samples; the international community has begun to debate the emergence of an ethical 'duty' to return research results to participants. Furthermore, the use of new technologies (e.g., whole-genome and -exome sequencing) has revealed both genetic data and incidental findings with possible clinical significance. These technologies together with the proliferation of biorepositories, provide a compelling rationale for governments and scientific institutions to adopt prospective policies. Given the scarcity of policies in the context of stem cell research, a discussion on the scientific, ethical and legal implications of disclosing research results for research participants is needed. We present the International Stem Forum Ethics Working Party's Policy Statement and trust that it will stimulate debate and meet the concerns of researchers and research participants alike.

35 citations


Journal ArticleDOI
TL;DR: Novel karyotyping assay, utilizing bead-bound bacterial artificial chromosome probes, provides a fast and easy tool for detection of chromosomal abnormalities in hPSC lines.

34 citations


Journal ArticleDOI
TL;DR: The recognition of genetic change and culture adaptation of these cells after prolonged culture has returned us to the cancer roots of pluripotent stem cells.

16 citations


Book ChapterDOI
01 Jan 2012
TL;DR: The issues surrounding culture adaptation of ES cells, and the potential impacts, both positive and negative, it may have on the use of these cells for regenerative medicine are discussed.
Abstract: The promise that human embryonic stem (ES) cells hold for regenerative medicine has generated much excitement since their initial derivation. However, before the potential of these cells can be realised, efficient differentiation protocols must be devised, and the cells should be shown to pose no safety risk. Despite initial reports suggesting that human ES cells are karyotypically stable, during the last decade it has become apparent that they do acquire genetic and/or epigenetic changes during culture, reflecting an adaptation to life in vitro. This culture adaptation can affect ES cell growth and differentiation, but of particular concern is the potential link between adaptation and cancer, which would become an issue if the cells are to be used for transplantation. In this chapter we discuss the issues surrounding culture adaptation of ES cells, and the potential impacts, both positive and negative, it may have on the use of these cells for regenerative medicine.

5 citations