P
Pooja Khatkar
Researcher at Georgetown University
Publications - 5
Citations - 75
Pooja Khatkar is an academic researcher from Georgetown University. The author has contributed to research in topics: Nucleotide excision repair & DNA repair. The author has an hindex of 3, co-authored 3 publications receiving 46 citations.
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Journal ArticleDOI
A new sub‐pathway of long‐patch base excision repair involving 5′ gap formation
Jordan Woodrick,Suhani Gupta,Sharon Camacho,Swetha Parvathaneni,Sujata Choudhury,Amrita K. Cheema,Yi Bai,Pooja Khatkar,Hayriye V. Erkizan,Furqan Sami,Yan Su,Orlando D. Schärer,Sudha Sharma,Rabindra Roy +13 more
TL;DR: A major sub‐pathway of conventional long‐patch BER that involves formation of a 9‐nucleotide gap 5′ to the lesion is discovered and is mediated by RECQ1 DNA helicase and ERCC1‐XPF endonuclease in cooperation with PARP1 poly(ADP‐ribose) polymerase and RPA.
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Slow repair of lipid peroxidation-induced DNA damage at p53 mutation hotspots in human cells caused by low turnover of a DNA glycosylase
Jordan Woodrick,Suhani Gupta,Pooja Khatkar,Sanchita Sarangi,Ganga Narasimhan,Akriti Trehan,Sanjay Adhikari,Rabindra Roy +7 more
TL;DR: In-cell and in vitro mechanism studies revealed that this delay in repair was due to inefficient turnover of N-methylpurine-DNA glycosylase (MPG), which initiates BER of εA, suggesting a previously unknown mechanism for slower repair at mutation hotspots and implicating sequence-related variability of DNA repair efficiency to be responsible for mutation hotspot signatures.
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Cannabinoids Reduce Extracellular Vesicle Release from HIV-1 Infected Myeloid Cells and Inhibit Viral Transcription
Catherine DeMarino,Maria Cowen,Pooja Khatkar,Bianca Cotto,Heather Branscome,Yuriy Kim,Sarah Al Sharif,Emmanuel Agbottah,Weidong Zhou,Cecilia T. Costiniuk,Mohammad-Ali Jenabian,Cohava Gelber,Lance A. Liotta,Dianne Langford,Fatah Kashanchi +14 more
TL;DR: The data suggest that CBD significantly reduces the number of EVs released from infected cells and that this may be mediated by reducing viral transcription and autophagy activation, which may exert a protective effect by alleviating the pathogenic effects of EVs in HIV-1 and CNS-related infections.
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Retroviral infection of human neurospheres and use of stem Cell EVs to repair cellular damage
Heather Branscome,Pooja Khatkar,Sarah Al Sharif,Dezhong Yin,Sheelamma Jacob,Maria Cowen,Yuriy Kim,James W. Erickson,Christine A. Brantner,N. El-Hage,Lance A. Liotta,Fatah Kashanchi +11 more
TL;DR: In this paper , the authors reported the generation of neurospheres from iPSC-derived neural progenitor cells (NPCs) and showed that these cultures are permissive to retroviral (e.g. HIV-1, HTLV-1) replication.
Journal ArticleDOI
A novel method for monitoring functional lesion-specific recruitment of repair proteins in live cells.
Jordan Woodrick,Suhani Gupta,Pooja Khatkar,Kalpana Dave,Darya Levashova,Sujata Choudhury,Hadi Elias,Tapas Saha,Susette C. Mueller,Rabindra Roy +9 more
TL;DR: This microscopy-based methodology is reliable in detecting the recruitment of proteins to specific DNA substrates and can be extended to study other in vivo DNA-protein relationships in any DNA sequence and in the context of any DNA structure in transfectable proliferating or quiescent cells.