S
Steven J. Wu
Researcher at Fred Hutchinson Cancer Research Center
Publications - 9
Citations - 1530
Steven J. Wu is an academic researcher from Fred Hutchinson Cancer Research Center. The author has contributed to research in topics: Chromatin & Epigenomics. The author has an hindex of 5, co-authored 9 publications receiving 455 citations. Previous affiliations of Steven J. Wu include University of Washington.
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Journal ArticleDOI
CUT&Tag for efficient epigenomic profiling of small samples and single cells
Hatice S. Kaya-Okur,Steven J. Wu,Steven J. Wu,Christine A. Codomo,Erica S. Pledger,Terri D. Bryson,Jorja G. Henikoff,Kami Ahmad,Steven Henikoff +8 more
TL;DR: Cleavage Under Targets and Tagmentation (CUT&Tag), an enzyme-tethering strategy that provides efficient high-resolution sequencing libraries for profiling diverse chromatin components, is described.
Posted ContentDOI
CUT&Tag for efficient epigenomic profiling of small samples and single cells
Hatice S. Kaya-Okur,Hatice S. Kaya-Okur,Steven J. Wu,Steven J. Wu,Christine A. Codomo,Christine A. Codomo,Erica S. Pledger,Terri D. Bryson,Terri D. Bryson,Jorja G. Henikoff,Kami Ahmad,Steven Henikoff,Steven Henikoff +12 more
TL;DR: Cleavage Under Targets and Tagmentation (CUT&Tag), an enzyme-tethering strategy that provides efficient high-resolution sequencing libraries for profiling diverse chromatin components, is described and demonstrated by profiling histone modifications, RNA Polymerase II and transcription factors on low cell numbers and single cells.
Journal ArticleDOI
Single-cell CUT&Tag analysis of chromatin modifications in differentiation and tumor progression.
Steven J. Wu,Steven J. Wu,Scott N. Furlan,Scott N. Furlan,Anca Mihalas,Anca Mihalas,Hatice S. Kaya-Okur,Hatice S. Kaya-Okur,Abdullah H. Feroze,Samuel Emerson,Ye Zheng,Kalee Carson,Patrick J. Cimino,Patrick J. Cimino,C. Dirk Keene,Jay F. Sarthy,Jay F. Sarthy,Raphael Gottardo,Kami Ahmad,Steven Henikoff,Steven Henikoff,Anoop P. Patel,Anoop P. Patel +22 more
TL;DR: In this article, the CUT&Tag method was adapted to scalable nanowell and droplet-based single-cell platforms to profile chromatin landscapes in single cells from complex tissues and during the differentiation of human embryonic stem cells.
Journal ArticleDOI
Automated in situ chromatin profiling efficiently resolves cell types and gene regulatory programs
Derek H. Janssens,Steven J. Wu,Steven J. Wu,Jay F. Sarthy,Jay F. Sarthy,Michael P. Meers,Carrie Myers,James M. Olson,James M. Olson,Kami Ahmad,Steven Henikoff,Steven Henikoff +11 more
TL;DR: The easy, cost-effective workflow makes automated CUT&RUN an attractive tool for high-throughput characterization of cell types and patient samples, and a continuous metric to identify cell-type-specific promoter and enhancer activities is developed.
Journal ArticleDOI
Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia.
Derek H. Janssens,Michael P. Meers,Steven J. Wu,Steven J. Wu,Ekaterina Babaeva,Soheil Meshinchi,Jay F. Sarthy,Jay F. Sarthy,Kami Ahmad,Steven Henikoff,Steven Henikoff +10 more
TL;DR: In this paper, a subset of KMT2A oncofusion-binding sites are marked by bivalent (H3K4me3 and H3K27me3) chromatin signatures, and single-cell CUT&Tag profiling reveals that these sites display cell-to-cell heterogeneity suggestive of lineage plasticity.