S
Sven Fillinger
Researcher at University of Tübingen
Publications - 11
Citations - 793
Sven Fillinger is an academic researcher from University of Tübingen. The author has contributed to research in topics: Data management & Computer science. The author has an hindex of 4, co-authored 7 publications receiving 255 citations.
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Journal ArticleDOI
The nf-core framework for community-curated bioinformatics pipelines.
Philip Ewels,Alexander Peltzer,Sven Fillinger,Harshil Patel,Johannes Alneberg,Andreas Wilm,Maxime Garcia,Paolo Di Tommaso,Sven Nahnsen +8 more
TL;DR: The nf-core framework is introduced as a means for the development of collaborative, peerreviewed, best-practice analysis pipelines that can be used across all institutions and research facilities and introduces a higher degree of portability as compared to custom in-house scripts.
Posted ContentDOI
nf-core: Community curated bioinformatics pipelines
Philip Ewels,Alexander Peltzer,Sven Fillinger,Alneberg J,Harshil Patel,Andreas Wilm,Maxime Garcia,Di Tommaso P,Sven Nahnsen +8 more
TL;DR: The nf-core framework as discussed by the authors provides a community-driven platform for the creation and development of best practice analysis pipelines written in the Nextflow language, which can be used across various institutions and research facilities.
Journal ArticleDOI
Challenges of big data integration in the life sciences
TL;DR: The state of big data in bioanalytical research is reviewed and an overview of the guidelines for its proper usage is provided, in combination with advances in machine learning, which creates exciting new research possibilities.
Journal ArticleDOI
A data management infrastructure for the integration of imaging and omics data in life sciences
Luis Eugenio Kuhn Cuellar,Andreas Friedrich,Gisela Gabernet,Luis de la Garza,Sven Fillinger,Adrian Seyboldt,Tobias Koch,Sven zur Oven-Krockhaus,Friederike Wanke,Sandra Richter,Wolfgang M. Thaiss,Marius Horger,Nisar P. Malek,Klaus Harter,Michael Bitzer,Sven Nahnsen +15 more
TL;DR: In this paper , the authors propose a Service Oriented Architecture approach for integrated management and analysis of multi-omics and biomedical imaging data, and exemplify its applicability for basic biology research and clinical studies.
Journal ArticleDOI
A data management infrastructure for the integration of imaging and omics data in life sciences
Luis Kuhn Cuellar,Andreas Friedrich,Gisela Gabernet,Luis de la Garza,Sven Fillinger,Adrian Seyboldt,Tobias Koch,Sven zur Oven-Krockhaus,Friederike Wanke,Sandra Richter,Wolfgang M. Thaiss,Marius Horger,Nisar P. Malek,Klaus Harter,Michael Bitzer,Sven Nahnsen +15 more
TL;DR: In this article , the authors propose a Service Oriented Architecture approach for integrated management and analysis of multi-omics and biomedical imaging data, and exemplify its applicability for basic biology research and clinical studies.