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Showing papers by "Thomas Bally published in 2015"


Journal ArticleDOI
TL;DR: In this paper, the role of the proline in hole distribution and transport within a PheProPhe tripeptide was investigated, and it was shown that prolines favor conformers which foster hyperconjugation of two amide groups, which lowers the ionization energy of peptides.

8 citations


Journal ArticleDOI
TL;DR: The well-studied benzene dimer radical cation, which is prototypical for this class of species, has been reinvestigated computationally and it turned out that both the σ-hemibonded and the half-shifted sandwich structures of the benzene cation represent stationary points on the B2PLYP-D potential energy surfaces.
Abstract: The well-studied benzene dimer radical cation, which is prototypical for this class of species, has been reinvestigated computationally. Thereby it turned out that both the σ-hemibonded and the half-shifted sandwich structures of the benzene dimer cation, which had been independently proposed, represent stationary points on the B2PLYP-D potential energy surfaces. However, these structures belong to distinct electronic states, both of which are associated with potential surfaces that are very flat with regard to rotation of the two benzene rings in an opposite sense relative to each other. The surfaces of these two “electromers” of the benzene dimer cation are separated by only 3–4 kcal mol−1 and do not intersect along the rotation coordinate, which represents a rather unique electronic structure situation. When moving on either of the two surfaces the title complex is an extremely fluxional species, in spite of its being bound by over 20 kcal mol−1.

8 citations


Journal ArticleDOI
TL;DR: This work has identified three different types of radical cation states in such peptides that are associated with significantly lower ionization potentials than those of the constituent amino acids, and which may thus serve as relay stations for hole transport through polyprolines.
Abstract: Electron transfer over long distances in proteins by a hopping process requires transient relay stations that can harbor charge and spin for a short time span. Certain easily oxidizable or reducible side chains may assume that role, but it has been shown that charge transport in peptides can also take place in the absence of such groups which implies that the peptide backbone provides for hopping stations. We have identified three different types of radical cation states in such peptides that are associated with significantly lower ionization potentials than those of the constituent amino acids, and which may thus serve as relay stations for hole transport. Which of these states is the most stable one depends on the nature and the conformation of the peptide. In contrast to α-helices which, due to their high dipole moments, can only form stable radical cation states that are localized on the C-terminal amino acids, polyprolines are capable of accommodating such states inside the PPII helices and those sta...

6 citations


Journal ArticleDOI
TL;DR: Electronic absorption spectra and quantum chemical calculations of the radical cations of m-terphenyl tert-butyl thioethers, where the S-t-Bu bond is forced to be perpendicular to the central phenyl ring, show the occurrence of through-space [π···S···π](+) bonding interactions which lead to a stabilization of theThioether radical cation.
Abstract: Electronic absorption spectra and quantum chemical calculations of the radical cations of m-terphenyl tert-butyl thioethers, where the S–t-Bu bond is forced to be perpendicular to the central phenyl ring, show the occurrence of through-space [π···S···π]+ bonding interactions which lead to a stabilization of the thioether radical cations. In the corresponding methyl derivatives there is a competition between delocalization of the hole that is centered on a p-AO of the S atom into the π-system of the central phenyl ring or through space into the flanking phenyl groups, which leads to a mixture of planar and perpendicular conformations in the radical cation. Adding a second m-terphenyl tert-butyl thioether moiety does not lead to further delocalization; the spin and charge remain in one of the two halves of the radical cation. These findings have interesting implications with regard to the role of methionines as hopping stations in electron transfer through proteins.

6 citations