T
Tyler Reddy
Researcher at Los Alamos National Laboratory
Publications - 32
Citations - 33122
Tyler Reddy is an academic researcher from Los Alamos National Laboratory. The author has contributed to research in topics: Python (programming language) & Membrane protein. The author has an hindex of 19, co-authored 29 publications receiving 13456 citations. Previous affiliations of Tyler Reddy include University of Oxford & Dalhousie University.
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Journal ArticleDOI
SciPy 1.0--Fundamental Algorithms for Scientific Computing in Python
Pauli Virtanen,Ralf Gommers,Travis E. Oliphant,Matt Haberland,Matt Haberland,Tyler Reddy,David Cournapeau,Evgeni Burovski,Pearu Peterson,Warren Weckesser,Jonathan Bright,Stefan van der Walt,Matthew Brett,Joshua Wilson,K. Jarrod Millman,Nikolay Mayorov,Andrew Nelson,Eric Jones,Robert Kern,Eric B. Larson,CJ Carey,Ilhan Polat,Yu Feng,Eric Moore,Jake Vanderplas,Denis Laxalde,Josef Perktold,Robert Cimrman,Ian Henriksen,Ian Henriksen,E. A. Quintero,Charles R. Harris,Anne M. Archibald,Antônio H. Ribeiro,Fabian Pedregosa,Paul van Mulbregt,SciPy . Contributors +36 more
TL;DR: SciPy as discussed by the authors is an open source scientific computing library for the Python programming language, which includes functionality spanning clustering, Fourier transforms, integration, interpolation, file I/O, linear algebra, image processing, orthogonal distance regression, minimization algorithms, signal processing, sparse matrix handling, computational geometry, and statistics.
Journal ArticleDOI
Array programming with NumPy
Charles R. Harris,K. Jarrod Millman,Stefan van der Walt,Stefan van der Walt,Ralf Gommers,Pauli Virtanen,David Cournapeau,Eric Wieser,Julian Taylor,Sebastian Berg,Nathaniel J. Smith,Robert Kern,Matti Picus,Stephan Hoyer,Marten H. van Kerkwijk,Matthew Brett,Matthew Brett,Allan Haldane,Jaime Fernández del Río,Mark Wiebe,Mark Wiebe,Pearu Peterson,Pierre Gérard-Marchant,Kevin Sheppard,Tyler Reddy,Warren Weckesser,Hameer Abbasi,Christoph Gohlke,Travis E. Oliphant +28 more
TL;DR: In this paper, the authors review how a few fundamental array concepts lead to a simple and powerful programming paradigm for organizing, exploring and analysing scientific data, and their evolution into a flexible interoperability layer between increasingly specialized computational libraries is discussed.
Journal ArticleDOI
SciPy 1.0: fundamental algorithms for scientific computing in Python.
Pauli Virtanen,Ralf Gommers,Travis E. Oliphant,Matt Haberland,Matt Haberland,Tyler Reddy,David Cournapeau,Evgeni Burovski,Pearu Peterson,Warren Weckesser,Jonathan Bright,Stefan van der Walt,Matthew Brett,Joshua Wilson,K. Jarrod Millman,Nikolay Mayorov,Andrew Nelson,Eric Jones,Robert Kern,Eric B. Larson,CJ Carey,Ilhan Polat,Yu Feng,Eric Moore,Jake Vanderplas,Denis Laxalde,Josef Perktold,Robert Cimrman,Ian Henriksen,Ian Henriksen,E. A. Quintero,Charles R. Harris,Anne M. Archibald,Antônio H. Ribeiro,Fabian Pedregosa,Paul van Mulbregt,SciPy . Contributors +36 more
TL;DR: SciPy as discussed by the authors is an open-source scientific computing library for the Python programming language, which has become a de facto standard for leveraging scientific algorithms in Python, with over 600 unique code contributors, thousands of dependent packages, over 100,000 dependent repositories and millions of downloads per year.
Journal ArticleDOI
Array Programming with NumPy
Charles R. Harris,K. Jarrod Millman,Stefan van der Walt,Stefan van der Walt,Ralf Gommers,Pauli Virtanen,David Cournapeau,Eric Wieser,Julian Taylor,Sebastian Berg,Nathaniel J. Smith,Robert Kern,Matti Picus,Stephan Hoyer,Marten H. van Kerkwijk,Matthew Brett,Matthew Brett,Allan Haldane,Jaime Fernández del Río,Mark Wiebe,Mark Wiebe,Pearu Peterson,Pierre Gérard-Marchant,Kevin Sheppard,Tyler Reddy,Warren Weckesser,Hameer Abbasi,Christoph Gohlke,Travis E. Oliphant +28 more
TL;DR: How a few fundamental array concepts lead to a simple and powerful programming paradigm for organizing, exploring and analysing scientific data is reviewed.
Proceedings ArticleDOI
MDAnalysis: A Python Package for the Rapid Analysis of Molecular Dynamics Simulations
Richard Gowers,Max Linke,Jonathan Barnoud,Tyler Reddy,Manuel N. Melo,Sean L. Seyler,Jan Domański,David L. Dotson,Sébastien Buchoux,Ian M. Kenney,Oliver Beckstein +10 more
TL;DR: MDAnalysis is a library for structural and temporal analysis of molecular dynamics simulation trajectories and individual protein structures that enables users to rapidly write code that is portable and immediately usable in virtually all biomolecular simulation communities.