V
Vijil Chenthamarakshan
Researcher at IBM
Publications - 52
Citations - 981
Vijil Chenthamarakshan is an academic researcher from IBM. The author has contributed to research in topics: Generative model & Information extraction. The author has an hindex of 15, co-authored 50 publications receiving 627 citations.
Papers
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Journal ArticleDOI
Fairness GAN: Generating datasets with fairness properties using a generative adversarial network
TL;DR: In this paper, the authors introduce the Fairness GAN, an approach for generating a dataset that is plausibly similar to a given multimedia dataset, but is more fair with respect to protected attributes in decision making.
Proceedings ArticleDOI
PROSPECT: a system for screening candidates for recruitment
Amit Singh,Catherine Rose,Karthik Visweswariah,Vijil Chenthamarakshan,Nandakishore Kambhatla +4 more
TL;DR: PROSPECT, a decision support tool to help screeners shortlist resumes efficiently is presented and it is shown that extracted information improves the ranking there by making screening task simpler and more efficient.
Journal ArticleDOI
Accelerated antimicrobial discovery via deep generative models and molecular dynamics simulations.
Payel Das,Payel Das,Tom Sercu,Tom Sercu,Kahini Wadhawan,Inkit Padhi,Sebastian Gehrmann,Sebastian Gehrmann,Flaviu Cipcigan,Vijil Chenthamarakshan,Hendrik Strobelt,Cicero Nogueira dos Santos,Cicero Nogueira dos Santos,Pin-Yu Chen,Yi Yan Yang,Jeremy P. K. Tan,James L. Hedrick,Jason Crain,Jason Crain,Aleksandra Mojsilovic +19 more
TL;DR: In this article, a computational method leveraging deep learning and molecular dynamics simulations enables the rapid discovery of antimicrobial peptides with low toxicity and with high potency against diverse Gram-positive and Gram-negative pathogens.
Proceedings Article
CogMol: Target-Specific and Selective Drug Design for COVID-19 Using Deep Generative Models
Vijil Chenthamarakshan,Payel Das,Samuel C. Hoffman,Hendrik Strobelt,Inkit Padhi,Kar Wai Lim,Benjamin Hoover,Matteo Manica,Jannis Born,Jannis Born,Teodoro Laino,Aleksandra Mojsilovic +11 more
TL;DR: A deep learning based generative modeling framework to design drug candidates specific to a given target protein sequence with high off-target selectivity is presented, and an in silico screening process that accounts for toxicity is augmented to lower the failure rate of the generated drug candidates in later stages of the drug development pipeline.
Proceedings ArticleDOI
Protein Representation Learning by Geometric Structure Pretraining
Zuobai Zhang,Minghao Xu,Arian R. Jamasb,Vijil Chenthamarakshan,Aurelie C. Lozano,Payel Das,Jia Tang +6 more
TL;DR: Experimental results show that the proposed pretraining methods outperform or are on par with the state-of-the-art sequence-based methods, while using much less data.