抗原变异可使得多种致病微生物易于逃避宿主免疫应答。表达在感染红细胞表面的恶性疟原虫红细胞表面蛋白1（PfPMP1）与感染红细胞、内皮细胞、树突状细胞以及胎盘的单个或多个受体作用，在黏附及免疫逃避中起关键的作用。每个单倍体基因组var基因家族编码约60种成员，通过启动转录不同的var基因变异体为抗原变异提供了分子基础。

疟原虫var基因转换速率变化导致抗原变异[英]／Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

The distributions of many terrestrial organisms are currently shifting in latitude or elevation in response to changing climate Using a meta-analysis, we estimated that the distributions of species have recently shifted to higher elevations at a median rate of 110 meters per decade, and to higher latitudes at a median rate of 169 kilometers per decade These rates are approximately two and three times faster than previously reported The distances moved by species are greatest in studies showing the highest levels of warming, with average latitudinal shifts being generally sufficient to track temperature changes However, individual species vary greatly in their rates of change, suggesting that the range shift of each species depends on multiple internal species traits and external drivers of change Rapid average shifts derive from a wide diversity of responses by individual species

/pdf/rapid-range-shifts-of-species-associated-with-high-levels-of-249w1ca3i9.pdf

Rapid Range Shifts of Species Associated with High Levels of Climate Warming

Genetics and analysis of quantitative traits

Palaeontologists characterize mass extinctions as times when the Earth loses more than three-quarters of its species in a geologically short interval, as has happened only five times in the past 540 million years or so. Biologists now suggest that a sixth mass extinction may be under way, given the known species losses over the past few centuries and millennia. Here we review how differences between fossil and modern data and the addition of recently available palaeontological information influence our understanding of the current extinction crisis. Our results confirm that current extinction rates are higher than would be expected from the fossil record, highlighting the need for effective conservation measures.

/pdf/has-the-earth-s-sixth-mass-extinction-already-arrived-dzhs0k1eir.pdf

Has the Earth’s sixth mass extinction already arrived?

Many studies in recent years have investigated the effects of climate change on the future of biodiversity. In this review, we first examine the different possible effects of climate change that can operate at individual, population, species, community, ecosystem and biome scales, notably showing that species can respond to climate change challenges by shifting their climatic niche along three non-exclusive axes: time (e.g. phenology), space (e.g. range) and self (e.g. physiology). Then, we present the principal specificities and caveats of the most common approaches used to estimate future biodiversity at global and sub-continental scales and we synthesise their results. Finally, we highlight several challenges for future research both in theoretical and applied realms. Overall, our review shows that current estimates are very variable, depending on the method, taxonomic group, biodiversity loss metrics, spatial scales and time periods considered. Yet, the majority of models indicate alarming consequences for biodiversity, with the worst-case scenarios leading to extinction rates that would qualify as the sixth mass extinction in the history of the earth.

/pdf/impacts-of-climate-change-on-the-future-of-biodiversity-3rngjb4k3z.pdf

Impacts of climate change on the future of biodiversity.

It is predicted that climate change will cause species extinctions and distributional shifts in coming decades, but data to validate these predictions are relatively scarce Here, we compare recent and historical surveys for 48 Mexican lizard species at 200 sites Since 1975, 12% of local populations have gone extinct We verified physiological models of extinction risk with observed local extinctions and extended projections worldwide Since 1975, we estimate that 4% of local populations have gone extinct worldwide, but by 2080 local extinctions are projected to reach 39% worldwide, and species extinctions may reach 20% Global extinction projections were validated with local extinctions observed from 1975 to 2009 for regional biotas on four other continents, suggesting that lizards have already crossed a threshold for extinctions caused by climate change

http://max2.ese.u-psud.fr/epc/conservation/PDFs/HIPE/Sinervo2010.pdf

Erosion of lizard diversity by climate change and altered thermal niches.

Climate change affects all levels of biology and is a major threat for biodiversity. Hence, it is fundamental to run biodiversity monitoring programs to understand the effects of climate change on the biota and to be able to adjust management and conservation accordingly. So far, however, very few existing monitoring programs allow for the detection of climate change effects, as shown by a survey undertaken by the European project EuMon. Despite this shortcoming, several methods exist which allow to make inferences from existing data by integrating data across different monitoring programs: correlative analyses, meta-analyses and models. In addition, experiments are thought to be useful tools to understand the effects of climate change on plants and animals. Here, we evaluate the utility of these four main approaches. All these methods allow to evaluate long term effects of climate change and make predictions of species’ future development, but they are arguable. We list and compare their benefits and inconveniences, which can lead to uncertainties in the extrapolation of species responses to global climate change. Individual characteristics and population parameters have to be more frequently monitored. The potential evolution of a species should be also modelled, to extrapolate results across spatial and temporal scales as well as to analyse the combined effects of different climatic and biotic factors, including intra but also interspecific relationships. We conclude that a combination of methodologies would be the most promising tool for the assessment of biological responses to climate change, and we provide some thoughts about how to do so. Particularly, we encourage long-term studies along natural gradients (altitudinal or latitudinal) on the same species/habitats to be able to extrapolate to large geographic scales, and to have more complete data sets, necessary to understand the mechanisms of responses. Such data may provide a more accurate base for simulations across spatial and temporal scales, especially if they are publicly available in a common database. These recommendations could allow the adaptation of species management and the development of conservation tools to climate change which threatens species.

/pdf/biodiversity-monitoring-some-proposals-to-adequately-study-476406szle.pdf

Biodiversity monitoring: some proposals to adequately study species’ responses to climate change

Climate warming is known to have effects on population dynamics through variations in survival, fecundity and density. However, the impacts of climate change on population composition are still poorly documented. Morphotypes are powerful markers to track changes in population composition. In the common lizard, Lacerta vivipara, individuals display two types of dorsal patterns: reticulated (R individuals) and linear (L individuals). We examined how local warming affected intrapopulation frequencies of these morphotypes across 11 years. We observed changes in morph frequency of dorsal patterns across years, paralleling the rise of spring temperatures. The proportion of R individuals increased with June temperatures in juveniles, yearlings, and adult males and females. Three mechanisms could explain these changes: phenotypic plasticity, microevolution and/or dispersal between populations. We investigated the ontogenetic determinism, fitness and recruitment rates associated with dorsal morphotypes. Dorsal pattern ontogeny showed temperature dependence but this relationship was not associated with the warming trend during this study. We found variation by morphotype in survival and clutch size, but these factors did not explain R frequency increases. Among all the parameters considered in this study, only a decrease of immigration, which was more pronounced in the L morphotype, could explain the change in population composition. To our knowledge, this provides the first evidence of the impact of climate warming on population composition due to its effects on immigration.

Virginie Lepetz

Papers

Erosion of lizard diversity by climate change and altered thermal niches.

Biodiversity monitoring: some proposals to adequately study species’ responses to climate change

Climate warming and the evolution of morphotypes in a reptile