X
Xiaoyue Zhao
Researcher at Cold Spring Harbor Laboratory
Publications - 3
Citations - 27
Xiaoyue Zhao is an academic researcher from Cold Spring Harbor Laboratory. The author has contributed to research in topics: Illumina Methylation Assay & CpG site. The author has an hindex of 2, co-authored 3 publications receiving 27 citations.
Papers
More filters
Journal ArticleDOI
Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation
Sitharthan Kamalakaran,Jude Kendall,Xiaoyue Zhao,Chunlao Tang,Sohail Khan,Kandasamy Ravi,Theresa Auletta,Michael Riggs,Yun Wang,Åslaug Helland,Bjørn Naume,Nevenka Dimitrova,Anne Lise Børresen-Dale,James W. Hicks,Robert Lucito +14 more
TL;DR: It is demonstrated that this methodology accurately identifies methylation profiles in cancer and in principle it can differentiate any CpG methylation alterations and can be adapted to analyze other species.
Patent
Method for the analysis of breast cancer disorders
TL;DR: In this paper, a method for the analysis of breast cancer disorders, comprising determining the genomic methylation status of one or more CpG dinucleotides in a sequence selected from the group of sequences according to SEQ ID NO. 1 to 10 and/or SEQID NO. 50 to 60, is presented.
Proceedings ArticleDOI
Classification method for microarray probe selection using sequence, thermodynamics and secondary structure parameters
Lalit Gupta,Sanjay Kumar,Randeep Singh,Rafi Shaik,Nevenka Dimitrova,Aparna Gorthi,B. Lakshmi,Deepa Pai,Sitharthan Kamalakaran,Xiaoyue Zhao,Michael Wigler +10 more
TL;DR: This paper validate the importance of various features currently used for designing an oligonucleotide probe, and a classification methodology is presented that can be used to predict the hybridization quality of a probe.